Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00817
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051714-1|AAK93138.1|  442|Drosophila melanogaster LD24865p pro...    74   2e-13
AE014296-603|AAF47741.2|  442|Drosophila melanogaster CG12034-PA...    74   2e-13
AF128112-1|AAD28257.1|  497|Drosophila melanogaster putative tra...    31   1.8  
AE014297-667|AAF54161.1|  915|Drosophila melanogaster CG2943-PA ...    30   4.2  
AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH0234...    29   7.3  
AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA...    29   7.3  

>AY051714-1|AAK93138.1|  442|Drosophila melanogaster LD24865p
           protein.
          Length = 442

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 32/72 (44%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = +1

Query: 514 RLINVYCTHLHAEY-HEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLS 690
           +++++Y  HLHAEY + +D Y  HRV+QA+ TA+F++ T   + + ILAGDLN  P D+S
Sbjct: 125 QMVHLYNAHLHAEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDIS 184

Query: 691 YKIISQLPSLLD 726
           YK++     +LD
Sbjct: 185 YKVLLYTSKMLD 196



 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 27/63 (42%), Positives = 44/63 (69%)
 Frame = +3

Query: 240 LELLGIPVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENLKNVLPYSYYF 419
           L + GIP VS +++ R +AI   L   +++IV LQEVW+++D   L++  + VLP+S+YF
Sbjct: 11  LNIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSHYF 70

Query: 420 YSG 428
           +SG
Sbjct: 71  HSG 73



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +2

Query: 425 WPLNGYIHKIHHGDWFGGKGVGLCRIKFG 511
           W +NGY H+I H DWFGGKGVGLCRI  G
Sbjct: 95  WSVNGYFHRIQHADWFGGKGVGLCRILVG 123


>AE014296-603|AAF47741.2|  442|Drosophila melanogaster CG12034-PA
           protein.
          Length = 442

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 32/72 (44%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = +1

Query: 514 RLINVYCTHLHAEY-HEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLS 690
           +++++Y  HLHAEY + +D Y  HRV+QA+ TA+F++ T   + + ILAGDLN  P D+S
Sbjct: 125 QMVHLYNAHLHAEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDIS 184

Query: 691 YKIISQLPSLLD 726
           YK++     +LD
Sbjct: 185 YKVLLYTSKMLD 196



 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 27/63 (42%), Positives = 44/63 (69%)
 Frame = +3

Query: 240 LELLGIPVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENLKNVLPYSYYF 419
           L + GIP VS +++ R +AI   L   +++IV LQEVW+++D   L++  + VLP+S+YF
Sbjct: 11  LNIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSHYF 70

Query: 420 YSG 428
           +SG
Sbjct: 71  HSG 73



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +2

Query: 425 WPLNGYIHKIHHGDWFGGKGVGLCRIKFG 511
           W +NGY H+I H DWFGGKGVGLCRI  G
Sbjct: 95  WSVNGYFHRIQHADWFGGKGVGLCRILVG 123


>AF128112-1|AAD28257.1|  497|Drosophila melanogaster putative
           transmembrane proteinnessy protein.
          Length = 497

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 452 IHHGDWFGGKGVGLCRIKFGRDSSMSIAHIFT 547
           +HH  +F G G GLC   +GRD+  S+  I T
Sbjct: 56  VHHM-FFAGCGAGLCYFNYGRDTYHSLIAILT 86


>AE014297-667|AAF54161.1|  915|Drosophila melanogaster CG2943-PA
           protein.
          Length = 915

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 179 YRKSITYHLIPIWNSH 226
           Y KS+ YH++P W SH
Sbjct: 157 YSKSVLYHVLPAWRSH 172


>AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH02340
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = +3

Query: 216 GIHTQYFHLELLGIPVVSKNKKERYEAISTYL-----LKSEHNIVCLQEVWSEKDYL 371
           G H Q+ H E+LGIPV+S  +K+ +    +++     L+  +  +C +++  E D L
Sbjct: 613 GNHIQHLH-EMLGIPVISNPQKQLHRCSVSFVEISLSLERRYCSLCNRQILFELDNL 668


>AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = +3

Query: 216 GIHTQYFHLELLGIPVVSKNKKERYEAISTYL-----LKSEHNIVCLQEVWSEKDYL 371
           G H Q+ H E+LGIPV+S  +K+ +    +++     L+  +  +C +++  E D L
Sbjct: 613 GNHIQHLH-EMLGIPVISNPQKQLHRCSVSFVEISLSLERRYCSLCNRQILFELDNL 668


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,951,909
Number of Sequences: 53049
Number of extensions: 764647
Number of successful extensions: 1875
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)