Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00817
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical pr...    79   3e-15
AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical ...    35   0.077
AF016684-16|AAB66213.1|  506|Caenorhabditis elegans Hypothetical...    32   0.41 
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    31   1.3  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr...    28   6.7  
CU457741-2|CAM36343.1|  574|Caenorhabditis elegans Hypothetical ...    28   6.7  
U80838-4|AAT48616.1|  648|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical
           protein T27F6.6 protein.
          Length = 434

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 520 INVYCTHLHAEY-HEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSYK 696
           +N Y THLHAEY  E+D+YL HR  QA+  A+FV+ T+  ADV I+ GDLN  P DL ++
Sbjct: 165 VNFYTTHLHAEYDRENDLYLPHRTAQAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFR 224

Query: 697 IISQLPSLLDPYNMKFEGTN 756
           +I     L D + M  E  N
Sbjct: 225 LILSHAKLFDAWRMSHEVEN 244



 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = +3

Query: 258 PVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENLKNVLPYSYYFYSG 428
           P+ S ++  R   I  Y++   ++IV LQE+WS  D++ L E + +V PY +YF+SG
Sbjct: 54  PIGSTDRVHRLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVSSVYPYFHYFHSG 110



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 422 QWPLNGYIHKIHHGDWFGGKGVGLCRIKFGRD 517
           ++ LNG+ H IH GDWFGGK VGL  I+   D
Sbjct: 131 RYSLNGFAHHIHRGDWFGGKVVGLTEIEIDGD 162


>AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical
           protein Y34B4A.8 protein.
          Length = 604

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = +1

Query: 514 RLINVYCTHLHAEYHED---DMYLAHRVLQAYST-AEFVKLTSSPAD-VSILAGDLNTAP 678
           R+IN Y T LHAE  E    +M +  RV +  +  +E+ K  +   D +++++ DL  A 
Sbjct: 94  RVINAYGTVLHAEVDEKVKLEMAMERRVYEELAPFSEYEKNVNKLKDKLNLVSTDLEIAQ 153

Query: 679 GDLSYKIISQLPSLLDPYNMKFEG 750
            DL  +        LD   MK+EG
Sbjct: 154 KDLEKENSMTHQESLDAIQMKYEG 177


>AF016684-16|AAB66213.1|  506|Caenorhabditis elegans Hypothetical
           protein F45C12.16 protein.
          Length = 506

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +1

Query: 523 NVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSY 693
           +VY  +LHA Y E       + L  Y       L +   +  I+ GDL    GD +Y
Sbjct: 325 DVYFKNLHANYCEGKEQYVKQALDMYEICWLTTLRALKPNCKIIGGDLKIQSGDEAY 381


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +3

Query: 228 QYFHLELLGIPVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENLKN 395
           +Y H+ L  I  ++K KK     I  +L K+  N++ LQE++ +  +L LK N  N
Sbjct: 5   EYLHVGLNRIFEIAKEKKNGKFRI--FLEKNVKNVIFLQEIFEKSLFLCLKINGSN 58


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 559 EDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSYKIISQLPSLL 723
           E+D +LAH+ ++ YS+  FV L SS     IL  +++     ++Y  ++ + SLL
Sbjct: 39  ENDYFLAHQKVRLYSSHNFVMLYSSS---KILMMEIDDLEKMITYDDVADVVSLL 90


>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 474 EEKVWVSVGSSLGETHQCLLHTSSRRIPRRRHVSSSSCASGILNSRV 614
           E  +  S  S L   HQ L   S++R+ RR    S S  SGI   RV
Sbjct: 531 EHAIRKSSDSCLHAHHQLLRSASAKRLLRRNSSPSVSMFSGITRDRV 577


>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 474 EEKVWVSVGSSLGETHQCLLHTSSRRIPRRRHVSSSSCASGILNSRV 614
           E  +  S  S L   HQ L   S++R+ RR    S S  SGI   RV
Sbjct: 531 EHAIRKSSDSCLHAHHQLLRSASAKRLLRRNSSPSVSMFSGITRDRV 577


>CU457741-2|CAM36343.1|  574|Caenorhabditis elegans Hypothetical
           protein C42C1.2 protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +1

Query: 493 LSDQVWERLINVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSP-ADVSILAGDLN 669
           L + V  RL  V  T LH + HE+  +  HR   +YS +E  +   +      ++ G L 
Sbjct: 194 LHEHVKSRLCEVLDTILHMDRHENLNFGKHRSESSYSMSEMSREDENRIRSEHLVKGALE 253

Query: 670 TAPGDLSYKI 699
           TA  D+  +I
Sbjct: 254 TAFLDMDEQI 263


>U80838-4|AAT48616.1|  648|Caenorhabditis elegans Hypothetical
           protein F47F6.5 protein.
          Length = 648

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 380 GEPKECTPIFLLLL---QWPLNGYIHKIHHGDWFGGKGVGLCRIKFGRDSSMSIAHIFTQ 550
           G   +CT +  L      W ++G  +++H+G +   +   +C+   G D    +A  +++
Sbjct: 136 GTKTQCTFLINLACAEDHWQIHGKCYRLHNGKYTWAQAKAICQTGVGDDVKSQVAIFYSE 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,507,072
Number of Sequences: 27780
Number of extensions: 410258
Number of successful extensions: 1045
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)