Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00817
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.61 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.81 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   5.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   7.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   10.0 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   10.0 

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 363 DYLYLKENLKNVLPYSYYFY 422
           D  +  E + NVL + YYFY
Sbjct: 13  DRFFFIEGMTNVLDFDYYFY 32


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 742 TSCYMDQEEMAVGILSYKTNPRVQYLNLQLV*KHQLVMMLI 620
           TS  ++   M + IL +     V+   L+ V KH ++ MLI
Sbjct: 330 TSISVESNTMFINILKFLKQKYVKNSKLEKVIKHDILRMLI 370


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 429 GHCKSSKNMGVHSLGSPLNIGNLFHSKLLANILYYV 322
           G   + KN G++ +       NL++S LL++ LYYV
Sbjct: 247 GESFTVKN-GIYGIALSPVTNNLYYSPLLSHGLYYV 281


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 384 NLKNVLPYSYYFYSGP*MGTYTKYIM--VTGLEEK 482
           N+ N  P     Y GP +  +TK+++  V+G ++K
Sbjct: 213 NITNSTPLLKKLYGGPLLRIFTKHMLDVVSGTQKK 247


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 384 NLKNVLPYSYYFYSGP*MGTYTKYIM--VTGLEEK 482
           N+ N  P     Y GP +  +TK+++  V+G ++K
Sbjct: 228 NITNSTPLLKKLYGGPLLRIFTKHMLDVVSGTQKK 262


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 750 PFKLHVIWIKKRWQLG 703
           PF+L V W +  WQ G
Sbjct: 88  PFELSVFWQQYPWQWG 103


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 573 IHVVFVVFCVKMCAIDIDESLPNLIR 496
           I ++  VFCV +C+ D +  + +L R
Sbjct: 11  ILLISAVFCVGLCSEDEERLVRDLFR 36


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 384 SPLNIGNLFHSKLLANILYYV 322
           SP+   NL++S L ++ LYYV
Sbjct: 260 SPVT-NNLYYSPLTSHSLYYV 279


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 490 SLSDQVWERLINVYCTHLH 546
           S + Q W+RL +++  H+H
Sbjct: 82  SFNAQSWQRLTSLHELHVH 100


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 384 SPLNIGNLFHSKLLANILYYV 322
           SP+   NL++S L +  LYYV
Sbjct: 260 SPMT-NNLYYSPLSSRSLYYV 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,623
Number of Sequences: 438
Number of extensions: 4800
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)