Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00816
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 765 KACLAFSTLVGVPVTLTMSLVSS 697
           K+C  F   +  P+TL   LVS+
Sbjct: 66  KSCRPFKAYIKDPLTLAQGLVST 88


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 97  VAEISNVSEGEMSVALKHHRHFVAR 171
           V  + NV  GE+ V L+ HR+ + R
Sbjct: 462 VFAVINVFSGELPVFLQEHRNGMYR 486


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 97  VAEISNVSEGEMSVALKHHRHFVAR 171
           V  + NV  GE+ V L+ HR+ + R
Sbjct: 462 VFAVINVFSGELPVFLQEHRNGMYR 486


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 385 VHVVPKSRTSLLNLMFKSNSLNVTL 459
           +H+ P+ +  ++ L  K NS  VTL
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTL 236


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 385 VHVVPKSRTSLLNLMFKSNSLNVTL 459
           +H+ P+ +  ++ L  K NS  VTL
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTL 236


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 385 VHVVPKSRTSLLNLMFKSNSLNVTL 459
           +H+ P+ +  ++ L  K NS  VTL
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTL 236


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 783  LSNFLSKACLAFSTLVGVPVTLTMSL 706
            L + LSK   +F+ + GVP+ L   L
Sbjct: 1307 LHHHLSKLIKSFNEIYGVPLLLFFGL 1332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,900
Number of Sequences: 336
Number of extensions: 4060
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)