Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00816
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   6.1  

>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = +2

Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKRRELMPTYDVHILL 688
           GP D I  +    NC G + ALLE   + + +      +R+L G    E+    D+ +L 
Sbjct: 125 GPYDYIPFSIGSRNCIGQRYALLE---MKVAIVRMVSFYRILPGDTMHEIRLKTDL-VLR 180

Query: 689 PPNEDTSDIVKVTGTP 736
           P   D S  +K+   P
Sbjct: 181 P---DKSIPIKLVARP 193


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 10  TEKDEDKEAIFIMGREEQVEAARKQLETAVAEI-SNVSE 123
           TEKD +++   +   EE +   R +LETA  ++  N +E
Sbjct: 518 TEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANE 556


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,499
Number of Sequences: 2352
Number of extensions: 16998
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)