Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00816
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 104 3e-22
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 104 3e-22
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 104 3e-22
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 104 3e-22
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 104 3e-22
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 104 3e-22
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 104 3e-22
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 31 6.2
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 31 6.2
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 31 6.2
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 31 6.2
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 31 6.2
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 31 6.2
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 31 6.2
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 31 6.2
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 31 6.2
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 31 6.2
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 31 6.2
BC011806-1|AAH11806.1| 249|Homo sapiens pleckstrin homology dom... 30 8.2
BC010011-1|AAH10011.1| 342|Homo sapiens CCDC104 protein protein. 30 8.2
AY358097-1|AAQ88464.1| 367|Homo sapiens phosphodiesterase Hl pr... 30 8.2
AK023249-1|BAB14486.1| 249|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF434819-1|AAL30774.1| 249|Homo sapiens phafin 2 protein. 30 8.2
AC015982-1|AAY24269.1| 303|Homo sapiens unknown protein. 30 8.2
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 762 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 821
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 822 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 867
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 837 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 896
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 897 QQITRDFSVQIKFPDRE 913
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 1008
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 1009 PAPELQSDIIAITGLAANLDRAKAGLLERV 1038
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 620 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 679
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 680 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 719
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 246 QRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF 425
Q + + G ++ E A+ I I+ +LE V+ + + R H ++GARG ++ I EF
Sbjct: 1098 QDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF 1157
Query: 426 DVQIKFPERDTTEGADVPSRDIDENAE 506
V I+FP+ + V + EN E
Sbjct: 1158 KVDIRFPQSGAPDPNCVTVTGLPENVE 1184
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 624 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 683
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 684 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 717
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVH 679
GP + + + E EG K L+ ++ +++ + ++ HR L G+ + Y V
Sbjct: 412 GPTEDVNVA--QEQIEGMVKDLINRMDY-VEINIDHKFHRHLIGKSGANINRIKDQYKVS 468
Query: 680 ILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
+ +PP+ + S+++++ G P V+ AK+ LL
Sbjct: 469 VRIPPDSEKSNLIRIEGDPQGVQQAKRELL 498
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 LKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQI 437
++G + ++ AK + E+ +E + T + +I QR HRT++G +G ++++I +F +V I
Sbjct: 483 IEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVII 542
Query: 438 KFPE 449
FP+
Sbjct: 543 NFPD 546
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 FPTEKD--EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRG 177
FP + D + ++ I I G E+ EAAR + V E+ + ++ + + H + RG
Sbjct: 1088 FPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARG 1147
Query: 178 EVLRRIAEDCGGVQISFPRQGVNSDRSCL 264
+ +R+I ++ V I FP+ G D +C+
Sbjct: 1148 KAIRKIMDEF-KVDIRFPQSGA-PDPNCV 1174
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVK 407
S A+ Q +++ G + V KAR +I+ L+ + + IP+ HHR V+G G K++
Sbjct: 118 SLAKDQGLSIMVSGKLDA--VMKAR-KDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQ 174
Query: 408 DITAEFDVQIKFPERD 455
D+ + +I+ P D
Sbjct: 175 DLELKTATKIQIPRPD 190
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAE 201
E I I G + V+ A+++L + + N ++ + + HR + ++GE +R I +
Sbjct: 476 EKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRD 535
Query: 202 DCGGVQISFPRQGVNSDRSCLRDQKN 279
V I+FP SD LR KN
Sbjct: 536 KFPEVIINFPDPAQKSDIVQLRGPKN 561
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 1005
Query: 435 IKFP 446
I P
Sbjct: 1006 IHVP 1009
Score = 39.1 bits (87), Expect = 0.018
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = +2
Query: 512 PNDIIKITGRPENCEGAKKALLEQV-----PITIDVEVPNELH-RLLA--GQKRRELMPT 667
P D I ITG +N E A+ A+L V ++ DV + + +H R++ G+ R++M
Sbjct: 1097 PQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 1156
Query: 668 YDVHILLPPN-EDTSDIVKVTGTPTSVENAKQALL 769
+ V I P + + V VTG P +VE A +L
Sbjct: 1157 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHIL 1191
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +2
Query: 524 IKITGRPENCEGAKKALLE--QVPITIDVEVPNELHRLLAG---QKRRELMPTYDVHILL 688
I ++G+ + A+K ++ Q + V +P E HR + G +K ++L I +
Sbjct: 127 IMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQI 186
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALL 769
P +D S+ +K+TGT +E A+ +L
Sbjct: 187 PRPDDPSNQIKITGTKEGIEKARHEVL 213
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 845 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 903
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 904 SVQIKFPDREENAVHS 919
Score = 37.5 bits (83), Expect = 0.054
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISN-VSEGEMSVALKHHRHFVARRGEVLR 189
E E ++ I + G E V A++Q+E V ++ N + E+++ K HRH + + G +
Sbjct: 400 EFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANIN 459
Query: 190 RIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
RI +D V + P S+ + ++ K E ++L
Sbjct: 460 RI-KDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLEL 500
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 700 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 759
Query: 432 QIKFP 446
++ FP
Sbjct: 760 RVIFP 764
Score = 36.7 bits (81), Expect = 0.095
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHRTVMGARGAKVKD 410
+ + G ++ AKA + E +++L+A+ + + ++H ++G +GA +
Sbjct: 1018 IAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQ 1077
Query: 411 ITAEFDVQIKFPERD 455
I E DV I+FP++D
Sbjct: 1078 IRLEHDVNIQFPDKD 1092
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQV-------------PITIDVEVPNELHRLLAGQKR-- 649
+DII ITG N + AK LLE+V + V V + H + G+K
Sbjct: 1015 SDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAV 1074
Query: 650 -RELMPTYDVHILLPPNED---TSDIVKVTGTPTSVENAKQALLR 772
++ +DV+I P +D D + +TG + E A+ A+LR
Sbjct: 1075 ITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILR 1119
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 1002
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 1003 EVNIHVPAPELQSD 1016
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 593 TIDVEVPNELHRLLAGQKR---RELMPTYDVHILLPPNEDTSDIVKVTGTPTSVENA 754
TI VEV H+ + G K +E++ V + +PP++ S+ V + G P + A
Sbjct: 297 TIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQA 353
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 83 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 142
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 143 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 188
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 158 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 217
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 218 QQITRDFSVQIKFPDRE 234
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 270 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 329
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 330 PAPELQSDIIAITGLAANLDRAKAGLLERV 359
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 246 QRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF 425
Q + + G ++ E A+ I I+ +LE V+ + + R H ++GARG ++ I EF
Sbjct: 419 QDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF 478
Query: 426 DVQIKFPERDTTEGADVPSRDIDENAE 506
V I+FP+ + V + EN E
Sbjct: 479 KVDIRFPQSGAPDPNCVTVTGLPENVE 505
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 FPTEKD--EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRG 177
FP + D + ++ I I G E+ EAAR + V E+ + ++ + + H + RG
Sbjct: 409 FPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARG 468
Query: 178 EVLRRIAEDCGGVQISFPRQGVNSDRSCL 264
+ +R+I ++ V I FP+ G D +C+
Sbjct: 469 KAIRKIMDEF-KVDIRFPQSGA-PDPNCV 495
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 272 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 326
Query: 435 IKFP 446
I P
Sbjct: 327 IHVP 330
Score = 39.1 bits (87), Expect = 0.018
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = +2
Query: 512 PNDIIKITGRPENCEGAKKALLEQV-----PITIDVEVPNELH-RLLA--GQKRRELMPT 667
P D I ITG +N E A+ A+L V ++ DV + + +H R++ G+ R++M
Sbjct: 418 PQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 477
Query: 668 YDVHILLPPN-EDTSDIVKVTGTPTSVENAKQALL 769
+ V I P + + V VTG P +VE A +L
Sbjct: 478 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHIL 512
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 166 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 224
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 225 SVQIKFPDREENAVHS 240
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 21 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 80
Query: 432 QIKFP 446
++ FP
Sbjct: 81 RVIFP 85
Score = 36.7 bits (81), Expect = 0.095
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHRTVMGARGAKVKD 410
+ + G ++ AKA + E +++L+A+ + + ++H ++G +GA +
Sbjct: 339 IAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQ 398
Query: 411 ITAEFDVQIKFPERD 455
I E DV I+FP++D
Sbjct: 399 IRLEHDVNIQFPDKD 413
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQV-------------PITIDVEVPNELHRLLAGQKR-- 649
+DII ITG N + AK LLE+V + V V + H + G+K
Sbjct: 336 SDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAV 395
Query: 650 -RELMPTYDVHILLPPNED---TSDIVKVTGTPTSVENAKQALLR 772
++ +DV+I P +D D + +TG + E A+ A+LR
Sbjct: 396 ITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILR 440
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 270 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 323
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 324 EVNIHVPAPELQSD 337
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 392 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 451
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 452 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 497
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 467 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 526
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 527 QQITRDFSVQIKFPDRE 543
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 579 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 638
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 639 PAPELQSDIIAITGLAANLDRAKAGLLERV 668
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 250 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 309
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 310 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 349
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 246 QRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF 425
Q + + G ++ E A+ I I+ +LE V+ + + R H ++GARG ++ I EF
Sbjct: 728 QDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF 787
Query: 426 DVQIKFPERDTTEGADVPSRDIDENAE 506
V I+FP+ + V + EN E
Sbjct: 788 KVDIRFPQSGAPDPNCVTVTGLPENVE 814
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 254 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 313
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 314 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 347
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVH 679
GP + + + E EG K L+ ++ +++ + ++ HR L G+ + Y V
Sbjct: 42 GPTEDVNVA--QEQIEGMVKDLINRMDY-VEINIDHKFHRHLIGKSGANINRIKDQYKVS 98
Query: 680 ILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
+ +PP+ + S+++++ G P V+ AK+ LL
Sbjct: 99 VRIPPDSEKSNLIRIEGDPQGVQQAKRELL 128
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 LKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQI 437
++G + ++ AK + E+ +E + T + +I QR HRT++G +G ++++I +F +V I
Sbjct: 113 IEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVII 172
Query: 438 KFPE 449
FP+
Sbjct: 173 NFPD 176
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 FPTEKD--EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRG 177
FP + D + ++ I I G E+ EAAR + V E+ + ++ + + H + RG
Sbjct: 718 FPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARG 777
Query: 178 EVLRRIAEDCGGVQISFPRQGVNSDRSCL 264
+ +R+I ++ V I FP+ G D +C+
Sbjct: 778 KAIRKIMDEF-KVDIRFPQSGA-PDPNCV 804
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAE 201
E I I G + V+ A+++L + + N ++ + + HR + ++GE +R I +
Sbjct: 106 EKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRD 165
Query: 202 DCGGVQISFPRQGVNSDRSCLRDQKN 279
V I+FP SD LR KN
Sbjct: 166 KFPEVIINFPDPAQKSDIVQLRGPKN 191
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 581 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 635
Query: 435 IKFP 446
I P
Sbjct: 636 IHVP 639
Score = 39.1 bits (87), Expect = 0.018
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = +2
Query: 512 PNDIIKITGRPENCEGAKKALLEQV-----PITIDVEVPNELH-RLLA--GQKRRELMPT 667
P D I ITG +N E A+ A+L V ++ DV + + +H R++ G+ R++M
Sbjct: 727 PQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 786
Query: 668 YDVHILLPPN-EDTSDIVKVTGTPTSVENAKQALL 769
+ V I P + + V VTG P +VE A +L
Sbjct: 787 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHIL 821
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 475 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 533
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 534 SVQIKFPDREENAVHS 549
Score = 37.5 bits (83), Expect = 0.054
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISN-VSEGEMSVALKHHRHFVARRGEVLR 189
E E ++ I + G E V A++Q+E V ++ N + E+++ K HRH + + G +
Sbjct: 30 EFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANIN 89
Query: 190 RIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
RI +D V + P S+ + ++ K E ++L
Sbjct: 90 RI-KDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLEL 130
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 330 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 389
Query: 432 QIKFP 446
++ FP
Sbjct: 390 RVIFP 394
Score = 36.7 bits (81), Expect = 0.095
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHRTVMGARGAKVKD 410
+ + G ++ AKA + E +++L+A+ + + ++H ++G +GA +
Sbjct: 648 IAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQ 707
Query: 411 ITAEFDVQIKFPERD 455
I E DV I+FP++D
Sbjct: 708 IRLEHDVNIQFPDKD 722
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQV-------------PITIDVEVPNELHRLLAGQKR-- 649
+DII ITG N + AK LLE+V + V V + H + G+K
Sbjct: 645 SDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAV 704
Query: 650 -RELMPTYDVHILLPPNED---TSDIVKVTGTPTSVENAKQALLR 772
++ +DV+I P +D D + +TG + E A+ A+LR
Sbjct: 705 ITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILR 749
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 579 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 632
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 633 EVNIHVPAPELQSD 646
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 762 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 821
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 822 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 867
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 837 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 896
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 897 QQITRDFSVQIKFPDRE 913
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 1008
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 1009 PAPELQSDIIAITGLAANLDRAKAGLLERV 1038
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 620 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 679
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 680 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 719
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 246 QRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF 425
Q + + G ++ E A+ I I+ +LE V+ + + R H ++GARG ++ I EF
Sbjct: 1098 QDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF 1157
Query: 426 DVQIKFPERDTTEGADVPSRDIDENAE 506
V I+FP+ + V + EN E
Sbjct: 1158 KVDIRFPQSGAPDPNCVTVTGLPENVE 1184
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 624 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 683
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 684 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 717
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVH 679
GP + + + E EG K L+ ++ +++ + ++ HR L G+ + Y V
Sbjct: 412 GPTEDVNVA--QEQIEGMVKDLINRMDY-VEINIDHKFHRHLIGKSGANINRIKDQYKVS 468
Query: 680 ILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
+ +PP+ + S+++++ G P V+ AK+ LL
Sbjct: 469 VRIPPDSEKSNLIRIEGDPQGVQQAKRELL 498
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 LKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQI 437
++G + ++ AK + E+ +E + T + +I QR HRT++G +G ++++I +F +V I
Sbjct: 483 IEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVII 542
Query: 438 KFPE 449
FP+
Sbjct: 543 NFPD 546
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 FPTEKD--EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRG 177
FP + D + ++ I I G E+ EAAR + V E+ + ++ + + H + RG
Sbjct: 1088 FPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARG 1147
Query: 178 EVLRRIAEDCGGVQISFPRQGVNSDRSCL 264
+ +R+I ++ V I FP+ G D +C+
Sbjct: 1148 KAIRKIMDEF-KVDIRFPQSGA-PDPNCV 1174
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVK 407
S A+ Q +++ G + V KAR +I+ L+ + + IP+ HHR V+G G K++
Sbjct: 118 SLAKDQGLSIMVSGKLDA--VMKAR-KDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQ 174
Query: 408 DITAEFDVQIKFPERD 455
D+ + +I+ P D
Sbjct: 175 DLELKTATKIQIPRPD 190
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAE 201
E I I G + V+ A+++L + + N ++ + + HR + ++GE +R I +
Sbjct: 476 EKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRD 535
Query: 202 DCGGVQISFPRQGVNSDRSCLRDQKN 279
V I+FP SD LR KN
Sbjct: 536 KFPEVIINFPDPAQKSDIVQLRGPKN 561
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 1005
Query: 435 IKFP 446
I P
Sbjct: 1006 IHVP 1009
Score = 39.1 bits (87), Expect = 0.018
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = +2
Query: 512 PNDIIKITGRPENCEGAKKALLEQV-----PITIDVEVPNELH-RLLA--GQKRRELMPT 667
P D I ITG +N E A+ A+L V ++ DV + + +H R++ G+ R++M
Sbjct: 1097 PQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 1156
Query: 668 YDVHILLPPN-EDTSDIVKVTGTPTSVENAKQALL 769
+ V I P + + V VTG P +VE A +L
Sbjct: 1157 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHIL 1191
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +2
Query: 524 IKITGRPENCEGAKKALLE--QVPITIDVEVPNELHRLLAG---QKRRELMPTYDVHILL 688
I ++G+ + A+K ++ Q + V +P E HR + G +K ++L I +
Sbjct: 127 IMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQI 186
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALL 769
P +D S+ +K+TGT +E A+ +L
Sbjct: 187 PRPDDPSNQIKITGTKEGIEKARHEVL 213
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 845 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 903
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 904 SVQIKFPDREENAVHS 919
Score = 37.5 bits (83), Expect = 0.054
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISN-VSEGEMSVALKHHRHFVARRGEVLR 189
E E ++ I + G E V A++Q+E V ++ N + E+++ K HRH + + G +
Sbjct: 400 EFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANIN 459
Query: 190 RIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
RI +D V + P S+ + ++ K E ++L
Sbjct: 460 RI-KDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLEL 500
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 700 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 759
Query: 432 QIKFP 446
++ FP
Sbjct: 760 RVIFP 764
Score = 36.7 bits (81), Expect = 0.095
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHRTVMGARGAKVKD 410
+ + G ++ AKA + E +++L+A+ + + ++H ++G +GA +
Sbjct: 1018 IAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQ 1077
Query: 411 ITAEFDVQIKFPERD 455
I E DV I+FP++D
Sbjct: 1078 IRLEHDVNIQFPDKD 1092
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQV-------------PITIDVEVPNELHRLLAGQKR-- 649
+DII ITG N + AK LLE+V + V V + H + G+K
Sbjct: 1015 SDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAV 1074
Query: 650 -RELMPTYDVHILLPPNED---TSDIVKVTGTPTSVENAKQALLR 772
++ +DV+I P +D D + +TG + E A+ A+LR
Sbjct: 1075 ITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILR 1119
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 1002
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 1003 EVNIHVPAPELQSD 1016
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 593 TIDVEVPNELHRLLAGQKR---RELMPTYDVHILLPPNEDTSDIVKVTGTPTSVENA 754
TI VEV H+ + G K +E++ V + +PP++ S+ V + G P + A
Sbjct: 297 TIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQA 353
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 259 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 318
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 319 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 364
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 334 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 393
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 394 QQITRDFSVQIKFPDRE 410
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 117 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 176
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 177 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 216
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDV 676
DII I+GR E CE AK+AL VP+TI+VEVP LHR + GQK R++M ++V
Sbjct: 446 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFNLHRYVIGQKGSGIRKMMDEFEV 501
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 121 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 180
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 181 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 214
Score = 38.7 bits (86), Expect = 0.023
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 448 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFNLHRYVIGQKGSGIRKMMDEFEVD 502
Query: 435 IKFPER 452
FP R
Sbjct: 503 -PFPGR 507
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 342 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 400
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 401 SVQIKFPDREENAVHS 416
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 324 LEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQIKFPE 449
+E + T + +I QR HRT++G +G ++++I +F +V I FP+
Sbjct: 1 MENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD 43
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 197 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 256
Query: 432 QIKFP 446
++ FP
Sbjct: 257 RVIFP 261
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAED 204
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 446 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFNLHRYVIGQKGSGIRKMMDE 498
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 106 ISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKN 279
+ N ++ + + HR + ++GE +R I + V I+FP SD LR KN
Sbjct: 1 MENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKN 58
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 445 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 504
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 505 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 550
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 520 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 579
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 580 QQITRDFSVQIKFPDRE 596
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 632 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 691
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 692 PAPELQSDIIAITGLAANLDRAKAGLLERV 721
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 303 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 362
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 363 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 402
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 307 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 366
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 367 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 400
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 LKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQI 437
++G + ++ AK + E+ LE + T + +I QR HRT++G +G ++++I +F +V I
Sbjct: 166 IEGDPQGVQQAKRELLELASRLENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVII 225
Query: 438 KFPE 449
FP+
Sbjct: 226 NFPD 229
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVH 679
GP + + + E EG K L+ ++ +++ + ++ HR L G+ + Y V
Sbjct: 95 GPTEDVNVA--QEQIEGMVKDLINRMDY-VEINIDHKFHRHLIGKSGANINRIKDQYKVS 151
Query: 680 ILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
+ +PP+ + S+++++ G P V+ AK+ LL
Sbjct: 152 VRIPPDSEKSNLIRIEGDPQGVQQAKRELL 181
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAE 201
E I I G + V+ A+++L + + N ++ + + HR + ++GE +R I +
Sbjct: 159 EKSNLIRIEGDPQGVQQAKRELLELASRLENERTKDLIIEQRFHRTIIGQKGERIREIRD 218
Query: 202 DCGGVQISFPRQGVNSDRSCLRDQKN 279
V I+FP SD LR KN
Sbjct: 219 KFPEVIINFPDPAQKSDIVQLRGPKN 244
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 634 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 688
Query: 435 IKFP 446
I P
Sbjct: 689 IHVP 692
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 528 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 586
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 587 SVQIKFPDREENAVHS 602
Score = 37.5 bits (83), Expect = 0.054
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISN-VSEGEMSVALKHHRHFVARRGEVLR 189
E E ++ I + G E V A++Q+E V ++ N + E+++ K HRH + + G +
Sbjct: 83 EFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANIN 142
Query: 190 RIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
RI +D V + P S+ + ++ K E ++L
Sbjct: 143 RI-KDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLEL 183
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 383 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 442
Query: 432 QIKFP 446
++ FP
Sbjct: 443 RVIFP 447
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 632 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 685
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 686 EVNIHVPAPELQSD 699
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 104 bits (250), Expect = 3e-22
Identities = 48/106 (45%), Positives = 70/106 (66%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
IFP +D+D++ I I+G+E+ V A+K+LE + + NV E M V KHHRHFV RRG+
Sbjct: 762 IFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQ 821
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLL 318
VLR IAE+ GGV +SFPR G SD+ L+ K+ ++ K +++
Sbjct: 822 VLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEII 867
Score = 101 bits (242), Expect = 3e-21
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKV 404
F + Q V LKG K+C+E AK RI EIIEDLEA+VT+EC IPQ+ HR+VMG +G+++
Sbjct: 837 FPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRI 896
Query: 405 KDITAEFDVQIKFPERD 455
+ IT +F VQIKFP+R+
Sbjct: 897 QQITRDFSVQIKFPDRE 913
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 518 DIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVHILL 688
DII I+GR E CE AK+AL VP+TI+VEVP +LHR + GQK R++M ++V+I +
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHV 1008
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
P E SDI+ +TG +++ AK LL ++
Sbjct: 1009 PAPELQSDIIAITGLAANLDRAKAGLLERV 1038
Score = 68.1 bits (159), Expect = 3e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 16 KDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRI 195
++ + E I I G+ EAAR ++ + +++N++E E+S+ K H + +G ++R I
Sbjct: 620 ENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSI 679
Query: 196 AEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
E+CGGV I FP +G SD +R + ++ K + + L
Sbjct: 680 MEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHL 719
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 246 QRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF 425
Q + + G ++ E A+ I I+ +LE V+ + + R H ++GARG ++ I EF
Sbjct: 1098 QDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF 1157
Query: 426 DVQIKFPERDTTEGADVPSRDIDENAE 506
V I+FP+ + V + EN E
Sbjct: 1158 KVDIRFPQSGAPDPNCVTVTGLPENVE 1184
Score = 46.8 bits (106), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLE-QVPIT----IDVEVPNELHRLLAGQKRRELMPTYD-- 673
++ I ITG+ NCE A+ +L Q + ++V +P +LH L G K R + +
Sbjct: 624 SETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 683
Query: 674 --VHILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
VHI P SD V + G + VE AK+ LL
Sbjct: 684 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLL 717
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLAGQKR---RELMPTYDVH 679
GP + + + E EG K L+ ++ +++ + ++ HR L G+ + Y V
Sbjct: 412 GPTEDVNVA--QEQIEGMVKDLINRMDY-VEINIDHKFHRHLIGKSGANINRIKDQYKVS 468
Query: 680 ILLPPNEDTSDIVKVTGTPTSVENAKQALL 769
+ +PP+ + S+++++ G P V+ AK+ LL
Sbjct: 469 VRIPPDSEKSNLIRIEGDPQGVQQAKRELL 498
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 LKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEF-DVQI 437
++G + ++ AK + E+ +E + T + +I QR HRT++G +G ++++I +F +V I
Sbjct: 483 IEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVII 542
Query: 438 KFPE 449
FP+
Sbjct: 543 NFPD 546
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 FPTEKD--EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRG 177
FP + D + ++ I I G E+ EAAR + V E+ + ++ + + H + RG
Sbjct: 1088 FPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARG 1147
Query: 178 EVLRRIAEDCGGVQISFPRQGVNSDRSCL 264
+ +R+I ++ V I FP+ G D +C+
Sbjct: 1148 KAIRKIMDEF-KVDIRFPQSGA-PDPNCV 1174
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVK 407
S A+ Q +++ G + V KAR +I+ L+ + + IP+ HHR V+G G K++
Sbjct: 118 SLAKDQGLSIMVSGKLDA--VMKAR-KDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQ 174
Query: 408 DITAEFDVQIKFPERD 455
D+ + +I+ P D
Sbjct: 175 DLELKTATKIQIPRPD 190
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAE 201
E I I G + V+ A+++L + + N ++ + + HR + ++GE +R I +
Sbjct: 476 EKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRD 535
Query: 202 DCGGVQISFPRQGVNSDRSCLRDQKN 279
V I+FP SD LR KN
Sbjct: 536 KFPEVIINFPDPAQKSDIVQLRGPKN 561
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+++ G KE E AK + ++ VTIE +P HR V+G +G+ ++ + EF+V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP-----VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVN 1005
Query: 435 IKFP 446
I P
Sbjct: 1006 IHVP 1009
Score = 39.1 bits (87), Expect = 0.018
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = +2
Query: 512 PNDIIKITGRPENCEGAKKALLEQV-----PITIDVEVPNELH-RLLA--GQKRRELMPT 667
P D I ITG +N E A+ A+L V ++ DV + + +H R++ G+ R++M
Sbjct: 1097 PQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 1156
Query: 668 YDVHILLPPN-EDTSDIVKVTGTPTSVENAKQALL 769
+ V I P + + V VTG P +VE A +L
Sbjct: 1157 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHIL 1191
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +2
Query: 524 IKITGRPENCEGAKKALLE--QVPITIDVEVPNELHRLLAG---QKRRELMPTYDVHILL 688
I ++G+ + A+K ++ Q + V +P E HR + G +K ++L I +
Sbjct: 127 IMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQI 186
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALL 769
P +D S+ +K+TGT +E A+ +L
Sbjct: 187 PRPDDPSNQIKITGTKEGIEKARHEVL 213
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ + + G ++ VEAA+K+++ + ++ E ++ K HR + +G +++I D
Sbjct: 845 DKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF- 903
Query: 211 GVQISFPRQGVNSDRS 258
VQI FP + N+ S
Sbjct: 904 SVQIKFPDREENAVHS 919
Score = 37.5 bits (83), Expect = 0.054
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISN-VSEGEMSVALKHHRHFVARRGEVLR 189
E E ++ I + G E V A++Q+E V ++ N + E+++ K HRH + + G +
Sbjct: 400 EFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANIN 459
Query: 190 RIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKL 315
RI +D V + P S+ + ++ K E ++L
Sbjct: 460 RI-KDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLEL 500
Score = 36.7 bits (81), Expect = 0.095
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDV 431
VV++GP +E AK ++ + E+ + K T++ +H+ ++G G K++ +
Sbjct: 700 VVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGA 759
Query: 432 QIKFP 446
++ FP
Sbjct: 760 RVIFP 764
Score = 36.7 bits (81), Expect = 0.095
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHRTVMGARGAKVKD 410
+ + G ++ AKA + E +++L+A+ + + ++H ++G +GA +
Sbjct: 1018 IAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQ 1077
Query: 411 ITAEFDVQIKFPERD 455
I E DV I+FP++D
Sbjct: 1078 IRLEHDVNIQFPDKD 1092
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQV-------------PITIDVEVPNELHRLLAGQKR-- 649
+DII ITG N + AK LLE+V + V V + H + G+K
Sbjct: 1015 SDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAV 1074
Query: 650 -RELMPTYDVHILLPPNED---TSDIVKVTGTPTSVENAKQALLR 772
++ +DV+I P +D D + +TG + E A+ A+LR
Sbjct: 1075 ITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILR 1119
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
+ I I GR+E+ EAA++ LE V E+ V HR+ + ++G +R++ ++
Sbjct: 949 DIIIISGRKEKCEAAKEALEALVPVTI-----EVEVPFDLHRYVIGQKGSGIRKMMDEF- 1002
Query: 211 GVQISFPRQGVNSD 252
V I P + SD
Sbjct: 1003 EVNIHVPAPELQSD 1016
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 593 TIDVEVPNELHRLLAGQKR---RELMPTYDVHILLPPNEDTSDIVKVTGTPTSVENA 754
TI VEV H+ + G K +E++ V + +PP++ S+ V + G P + A
Sbjct: 297 TIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQA 353
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 62 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 121
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 122 GSLIGKGGCKIKEIRESTGAQVQ 144
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARI-NEIIEDLEAK-----------VTIECVIPQRHH 371
S C +R + L GP I A A I +++ ED+ + VT+ V+P
Sbjct: 50 SEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQC 109
Query: 372 RTVMGARGAKVKDITAEFDVQIK 440
+++G G K+K+I Q++
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQ 132
>BC011806-1|AAH11806.1| 249|Homo sapiens pleckstrin homology domain
containing, family F (with FYVE domain) member 2
protein.
Length = 249
Score = 30.3 bits (65), Expect = 8.2
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 645 F*PANRR--CNSLGTSTSIVIGTCSRRAFLAPSQFSGRPV 532
F P NRR C G +V G CS + FL PSQ S +PV
Sbjct: 166 FTPVNRRHHCRKCGF---VVCGPCSEKRFLLPSQ-SSKPV 201
>BC010011-1|AAH10011.1| 342|Homo sapiens CCDC104 protein protein.
Length = 342
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLLR 321
V + I ++I R GV D CL D +V+ L+HE MK+LR
Sbjct: 114 VQKNIEMQLQAIRIIQERNGVLPD--CLTDGSDVVSDLEHEEMKILR 158
>AY358097-1|AAQ88464.1| 367|Homo sapiens phosphodiesterase Hl
protein.
Length = 367
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLLR 321
V + I ++I R GV D CL D +V+ L+HE MK+LR
Sbjct: 139 VQKNIEMQLQAIRIIQERNGVLPD--CLTDGSDVVSDLEHEEMKILR 183
>AK023249-1|BAB14486.1| 249|Homo sapiens protein ( Homo sapiens
cDNA FLJ13187 fis, clone NT2RP3004242, weakly similar to
PUTATIVE RHO/RAC GUANINE NUCLEOTIDE EXCHANGE FACTOR. ).
Length = 249
Score = 30.3 bits (65), Expect = 8.2
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 645 F*PANRR--CNSLGTSTSIVIGTCSRRAFLAPSQFSGRPV 532
F P NRR C G +V G CS + FL PSQ S +PV
Sbjct: 166 FTPVNRRHHCRKCGF---VVCGPCSEKRFLLPSQ-SSKPV 201
>AF434819-1|AAL30774.1| 249|Homo sapiens phafin 2 protein.
Length = 249
Score = 30.3 bits (65), Expect = 8.2
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 645 F*PANRR--CNSLGTSTSIVIGTCSRRAFLAPSQFSGRPV 532
F P NRR C G +V G CS + FL PSQ S +PV
Sbjct: 166 FTPVNRRHHCRKCGF---VVCGPCSEKRFLLPSQ-SSKPV 201
>AC015982-1|AAY24269.1| 303|Homo sapiens unknown protein.
Length = 303
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLLR 321
V + I ++I R GV D CL D +V+ L+HE MK+LR
Sbjct: 75 VQKNIEMQLQAIRIIQERNGVLPD--CLTDGSDVVSDLEHEEMKILR 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,544,503
Number of Sequences: 237096
Number of extensions: 2334951
Number of successful extensions: 6842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6835
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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