Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00816
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 31 0.71
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 31 0.71
U23514-1|AAC46543.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical... 31 1.2
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 30 2.2
U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine rec... 29 2.9
AC084268-1|AAM81103.2| 425|Caenorhabditis elegans Hypothetical ... 29 2.9
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 29 3.8
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 3.8
U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical pr... 29 3.8
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/117 (30%), Positives = 71/117 (60%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
+FP E D +KE I ++G++E V A+ LE A+ ++S + +++V K++++F+AR
Sbjct: 745 MFPKEGDAEKETIHLLGKKEDVPKAKAALEDAIKQLSETVDIKITVDPKYYKNFLARGAA 804
Query: 181 VLRRIAEDCGGVQISFPRQGVNSDRSCLRDQKNVLK*LKHESMKLLRIWKQRLRLNV 351
+++ I E GGV ISFP+ G +S +R K ++ K+ ++ +++++ NV
Sbjct: 805 LVKEIQEQNGGVVISFPKNGTDSSEVSIRGSKQCVEAAKNRIEDVVEDYEKQITDNV 861
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/116 (31%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
V ++G K+C+E AK RI +++ED E ++T IP + HR ++ RGAK+ ++ ++++V
Sbjct: 830 VSIRGSKQCVEAAKNRIEDVVEDYEKQITDNVTIPAQFHRGLLAGRGAKIHELQSKYNVS 889
Query: 435 IKFP--ERDTTEGAD---VPSRDID-ENAEPDLMT*LR*RVALKIAKELKRLFLNR 584
I+FP + +EG+D V RD E A+ L+ + +++ ++ R + R
Sbjct: 890 IRFPNNREEGSEGSDQVTVSGRDTKVEEAKEALLAMVPISKVIQLPVDMHRSIIGR 945
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLL---AGQKRRELMPTYDVHIL 685
+D + ++GR E AK+ALL VPI+ +++P ++HR + G+ R+LM YDV+I
Sbjct: 903 SDQVTVSGRDTKVEEAKEALLAMVPISKVIQLPVDMHRSIIGRGGETVRKLMQDYDVNIS 962
Query: 686 LPPNEDTSDIVKVTGTPTSVENAKQALLRKL 778
+P + + DI VTG +V+ A +AL KL
Sbjct: 963 IPKDNSSEDIT-VTGQTENVDQALEALRGKL 992
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +3
Query: 228 SSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVK 407
S ++ + VV+KG + E A+ARI I DL+ + + E IP+ HH ++G GA ++
Sbjct: 103 SESKDGELTVVVKGERAKAEEARARI---IRDLQTQASREIDIPKDHHGRLIGKEGALLR 159
Query: 408 DITAEFDVQIKFPERD 455
++ AE + +I+ P RD
Sbjct: 160 NLEAETNCRIQIPNRD 175
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +1
Query: 13 EKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRR 192
E D I + G++ VE A QL E++NV+E + + K F ++
Sbjct: 602 ESGSDDGKITVTGKQANVEKAVAQLNKIQEELANVAEESIEIPQKVQSRFFGNGRRLISD 661
Query: 193 IAEDCGGVQISFPRQGVNSDRSCLR 267
I ++CGGV I FP + S + +R
Sbjct: 662 IEDECGGVHIRFPSEKSESTKVTIR 686
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 1 IFPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGE 180
I +++ E I I G EE+ +E ++E+ ++ E+S+ ++H + +RG+
Sbjct: 1039 IINVPREDGNETITIQGYEEKANECAAAIEEMISELRSMFTQEISLDARYHPRLIGQRGK 1098
Query: 181 VLRRIAEDCGGVQISFPRQG 240
L+++ ED V+I PRQG
Sbjct: 1099 NLKKVMEDY-RVEIRLPRQG 1117
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 22 EDKEAIFIMGREEQVEAARKQLETAVAEIS-NVSEGEMSVALKHHRHFVARRGEVLRRIA 198
++ IF+ G E+V+ A + L VA + ++ ++ V HRH + R G ++ +I
Sbjct: 386 DNSNQIFLEGSPEEVKLAFEPLSKEVARLQMELAIEKVKVHPTLHRHVIGRGGSLISKI- 444
Query: 199 EDCGGVQISFPRQGVNSDRSCLRDQKNVLK 288
+D GVQI+ P + NSD + +K +K
Sbjct: 445 KDQHGVQITIPNEETNSDEIVVEGKKEGVK 474
Score = 35.5 bits (78), Expect = 0.043
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 300 RINEIIEDLEAKVTIECVI--PQRHHRTVMGARGAKVKDITAEFDVQIKFPERDTTEGAD 473
++ E E L A V I VI P HR+++G G V+ + ++DV I P+ +++E
Sbjct: 914 KVEEAKEALLAMVPISKVIQLPVDMHRSIIGRGGETVRKLMQDYDVNISIPKDNSSEDIT 973
Query: 474 V--PSRDIDENAE 506
V + ++D+ E
Sbjct: 974 VTGQTENVDQALE 986
Score = 34.7 bits (76), Expect = 0.076
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Frame = +2
Query: 554 EGAKKALLEQVPITIDVE--------VPNELHRLLAGQKRRELMPTYDVH----ILLPPN 697
EG KKA+ E I +E +P LH+L+ G K + D H ++ P
Sbjct: 471 EGVKKAVTEIRAIVTKIENEKSRDIIIPQRLHKLIIGSKGSGVQVIRDSHPNVSVVFPDA 530
Query: 698 EDTSDIVKVTGTPTSVE 748
+ SD+V + G T V+
Sbjct: 531 KSKSDVVNIRGDKTEVD 547
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 225 FSSARCQQRPVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQ-RHHRTVMGARGAK 401
F S + + V ++GP + A ++ + +D E + V + HR ++G G+K
Sbjct: 673 FPSEKSESTKVTIRGPAGDVAKAVGLLSALAKDKEENYVEDTVKAKPEFHRFLIGKGGSK 732
Query: 402 VKDITAEFDVQIKFPERDTTE 464
+ + +V++ FP+ E
Sbjct: 733 IAKLRDTLNVRVMFPKEGDAE 753
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 4 FPTEKDEDKEAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEV 183
FP + D + I G ++ VEAA+ ++E V + +++ + HR +A RG
Sbjct: 820 FP-KNGTDSSEVSIRGSKQCVEAAKNRIEDVVEDYEKQITDNVTIPAQFHRGLLAGRGAK 878
Query: 184 LRRIAEDCGGVQISFP 231
+ + + V I FP
Sbjct: 879 IHEL-QSKYNVSIRFP 893
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +3
Query: 255 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 434
+ + G K+ + A I +IIE + +I+ + + HR ++G + + D+ +
Sbjct: 253 ISVTGEKDGVLRVAAEIRQIIESKKNVSSIQVAVARTQHRYIVGQSRSGIHDVLQKTGCV 312
Query: 435 IKFPERDT 458
++ P D+
Sbjct: 313 VEVPAEDS 320
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 31 EAIFIMGREEQVEAARKQLETAVAEISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCG 210
E I + G ++ V ++ + NVS +++VA HR+ V + + + + G
Sbjct: 251 EVISVTGEKDGVLRVAAEIRQIIESKKNVSSIQVAVARTQHRYIVGQSRSGIHDVLQKTG 310
Query: 211 GVQISFPRQGVNSDRSCL 264
V + P + SD+ L
Sbjct: 311 CV-VEVPAEDSGSDQVTL 327
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 515 NDIIKITGRPENCEGAKKALLEQVP--ITIDVEVPNELHRLLAGQKRRELMPTYDVHILL 688
+D + + G ++ A ++E+ +T + PN LH+ L G K L +
Sbjct: 322 SDQVTLIGNAQDLAKALALVIERASSVVTQSISAPNWLHKHLIGPKGATLTALVPNRNNV 381
Query: 689 PPNEDTSDIVKVTGTPTSVENAKQALLRKLLR 784
D S+ + + G+P V+ A + L +++ R
Sbjct: 382 QIEFDNSNQIFLEGSPEEVKLAFEPLSKEVAR 413
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Frame = +2
Query: 509 GPNDIIKITGRPENCEGAKKALL-----EQVPITIDVEVPNELHRLLAGQKRR---ELMP 664
GP+ I ITG E + A +L E T + P L + G K L
Sbjct: 176 GPSSKITITGPREGIQRAAAHILAVSEREAKLATEHIVCPKNLVAFVRGPKNETYDRLTQ 235
Query: 665 TYDVHILLPPNEDTSDIVKVTGTPTSV 745
V I +PP T++++ VTG V
Sbjct: 236 NNGVKINIPPPHVTNEVISVTGEKDGV 262
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 384 GARGAKVKDITAEFDVQIKFPERDTTEG-ADVPSRDIDENAE 506
G RG + +++ E D+ K PE+D E AD+P+ NA+
Sbjct: 693 GQRGDEEEELLIEVDIDGKIPEKDENEAVADIPNAPNAPNAQ 734
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 384 GARGAKVKDITAEFDVQIKFPERDTTEG-ADVPSRDIDENAE 506
G RG + +++ E D+ K PE+D E AD+P+ NA+
Sbjct: 693 GQRGDEEEELLIEVDIDGKIPEKDENEAVADIPNAPNAPNAQ 734
>U23514-1|AAC46543.1| 817|Caenorhabditis elegans Hypothetical
protein F48E8.6 protein.
Length = 817
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 103 EISNVSEGEMSVALKHHRHFVARRGEVLRRIAEDCGGVQISFPR 234
E+ ++S+G +K + R +VLR+ ED G ++I PR
Sbjct: 449 ELPDISDGNTPFEIKEKTLMLHRIAQVLRQKREDSGALRIELPR 492
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 342 IECVIPQRHHRTVMGARGAKVKDITAEFDVQIKF 443
I CV+ ++H ++G G+ +KDI + ++ F
Sbjct: 189 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDF 222
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 342 IECVIPQRHHRTVMGARGAKVKDITAEFDVQIKF 443
I CV+ ++H ++G G+ +KDI + ++ F
Sbjct: 313 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDF 346
>AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical
protein Y66D12A.15 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 103 EISNVSEGEMSVALKHHRHFV-ARRGEVLRRIAED 204
++ VS G++ + LKH+R+FV +R +V++++ +D
Sbjct: 157 QMCTVSYGKVKLVLKHNRYFVESRHSDVMQKLLKD 191
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 583 LFKKSLFSSFAIFRATRYLNYVIRSGSAFSSISLLGTS 470
LF+K +F + Y V++S SAFSS++ L T+
Sbjct: 71 LFEKQIFPVVTVCNMNPYKYSVVKSNSAFSSVNTLMTT 108
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 342 IECVIPQRHHRTVMGARGAKVKDITAEFDVQIK-FPERDTTE 464
I+ V+P V+G GA +KDI +F QI+ +P+ + E
Sbjct: 136 IKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVE 177
>U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine
receptor, class w protein71 protein.
Length = 353
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 562 SSFAIFRATRYLNYVIRSGSAFSS 491
SSF + A+ YLNYVI GS F S
Sbjct: 282 SSFILVSASSYLNYVIGYGSVFIS 305
>AC084268-1|AAM81103.2| 425|Caenorhabditis elegans Hypothetical
protein Y92H12BL.1 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 497 LINISAG--NICTFCSVTFREFDLNIKFSSDVLDFGTTCTHDSSVMSLW 357
+++IS G N CT+C DL +D+++ HD V LW
Sbjct: 67 VLSISTGCLNNCTYCKTKMARGDLVSYPLADLVEQARAAFHDEGVKELW 115
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 374 SVMSLWNHTFNRNLCFQILNNFIDSCFSYFNTFFWSLKHD 255
+V S WN T ++ +LN IDS +S NT S++++
Sbjct: 1977 TVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAASMENE 2016
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 374 SVMSLWNHTFNRNLCFQILNNFIDSCFSYFNTFFWSLKHD 255
+V S WN T ++ +LN IDS +S NT S++++
Sbjct: 1977 TVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAASMENE 2016
>U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical
protein ZK418.8 protein.
Length = 279
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 273 KECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIK--- 440
++C+++ + RI EII++++ T E + + ++G G +K + +F V I+
Sbjct: 142 EQCVKLVRLRIAEIIDNVQKPWKTAEFEVETQMVGYLVGRGGRHIKTLRDKFSVNIQISD 201
Query: 441 -FPERDTTEGADVPSRDIDENAEPDLM 518
P+ T V RD+ E +++
Sbjct: 202 PIPDDPTRSLVTVRGRDLTALKEVEVV 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,063,306
Number of Sequences: 27780
Number of extensions: 388134
Number of successful extensions: 1425
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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