Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00816
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    25   0.80 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   4.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   4.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 515 NDIIKITGRPENCEGAKKALLEQVPITIDVEVPNE 619
           NDI+K+    E   GA   L+    I IDV + N+
Sbjct: 69  NDILKVIEWVEKNLGAIDILINNATINIDVTLQND 103


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 763 GLFSIFNTGWSSCHLNNVTGIFIGWQ*DVNIICWHQFSP 647
           G+  IFNT  S+  ++    +F G   +  I CW++  P
Sbjct: 298 GIQDIFNTQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQP 336


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 591 LQLTLKCPMNCIVY 632
           + LTL CPMN  +Y
Sbjct: 154 ISLTLSCPMNLKLY 167


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 591 LQLTLKCPMNCIVY 632
           + LTL CPMN  +Y
Sbjct: 154 ISLTLSCPMNLKLY 167


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 535 RYLNYVIRSGSAFSSISL 482
           ++LNY+ R G   +SIS+
Sbjct: 317 KFLNYLKRGGKTLTSISV 334


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 214 LHHNPRQYDVALH 176
           L H P QY +A+H
Sbjct: 513 LDHQPYQYKIAVH 525


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = -1

Query: 544 RATRYLNYVIRSGSAFSSISLLGTSAPSVVSRSGNLI*TSNSAVMSLTL 398
           R T Y+  +  + +   SIS +       +++SG+++  +     +LT+
Sbjct: 169 RYTHYIGTLATNDNILESISYVKDDGTEGIAKSGDVLVETEPIYYNLTM 217


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 542 PENCEGAKKALLEQVPITIDVEVPNELH 625
           P N EG    L +     +DV +P +LH
Sbjct: 658 PANIEGTSYFLNDYKHKDVDVTLPLDLH 685


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,772
Number of Sequences: 438
Number of extensions: 4894
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)