Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00815
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   3.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 51  YDYHYMYLMIILPNALYRIFINFSIHNLTVGNLYVF 158
           Y ++Y +++++     Y  FI F++H L +  +Y F
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 45  IIYDYHYM-YLMIILPNALYRI---FINFSIHNLTVGNLYVF 158
           II+  H + Y ++I+   +Y     FI F++H L +  +Y F
Sbjct: 220 IIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF 261


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 524 PLYSLHFIKVGMTINLERLSVLN 456
           P Y  HF K  + +  E   VLN
Sbjct: 37  PCYGRHFFKKNLIVGSENCLVLN 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,534
Number of Sequences: 336
Number of extensions: 3486
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)