Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00815
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5 prot...    89   1e-17
AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein...    89   1e-17
AY284131-1|AAP32573.1|  313|Homo sapiens putative olfactory rece...    31   5.2  
AY284121-1|AAP32563.1|  313|Homo sapiens putative olfactory rece...    31   5.2  
AY284113-1|AAP32555.1|  313|Homo sapiens putative olfactory rece...    31   5.2  

>BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5
           protein.
          Length = 123

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +1

Query: 250 EITRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 426
           E  RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + +  +F+Y  VG+
Sbjct: 14  EFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGE 73

Query: 427 REYWKDKECPFRTDSRSKLMVIPTLIK 507
           + YWKD    FR     K+  +PTL+K
Sbjct: 74  KPYWKDPNNDFR--KNLKVTAVPTLLK 98


>AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein
           protein.
          Length = 123

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +1

Query: 250 EITRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 426
           E  RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + +  +F+Y  VG+
Sbjct: 14  EFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGE 73

Query: 427 REYWKDKECPFRTDSRSKLMVIPTLIK 507
           + YWKD    FR     K+  +PTL+K
Sbjct: 74  KPYWKDPNNDFR--KNLKVTAVPTLLK 98


>AY284131-1|AAP32573.1|  313|Homo sapiens putative olfactory
           receptor protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 677 FMVHNIIYSYIIVGNLSIRICLKRIGDFSYLIVFFEQHLQKFPIAALASFKPLYSLHFIK 498
           F+V  +IY   ++GN+SI + ++        + FF  HL    +    +  P   ++F+ 
Sbjct: 28  FVVFLVIYLITVIGNVSIILLIRSDSTLHTPMYFFLSHLSFVDLCYTTNVTPQMLVNFLS 87

Query: 497 VGMTIN 480
              TI+
Sbjct: 88  KRKTIS 93


>AY284121-1|AAP32563.1|  313|Homo sapiens putative olfactory
           receptor protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 677 FMVHNIIYSYIIVGNLSIRICLKRIGDFSYLIVFFEQHLQKFPIAALASFKPLYSLHFIK 498
           F+V  +IY   ++GN+SI + ++        + FF  HL    +    +  P   ++F+ 
Sbjct: 28  FVVFLVIYLITVIGNVSIILLIRSDSTLHTPMYFFLSHLSFVDLCYTTNVTPQMLVNFLS 87

Query: 497 VGMTIN 480
              TI+
Sbjct: 88  KRKTIS 93


>AY284113-1|AAP32555.1|  313|Homo sapiens putative olfactory
           receptor protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 677 FMVHNIIYSYIIVGNLSIRICLKRIGDFSYLIVFFEQHLQKFPIAALASFKPLYSLHFIK 498
           F+V  +IY   ++GN+SI + ++        + FF  HL    +    +  P   ++F+ 
Sbjct: 28  FVVFLVIYLITVIGNVSIILLIRSDSTLHTPMYFFLSHLSFVDLCYTTNVTPQMLVNFLS 87

Query: 497 VGMTIN 480
              TI+
Sbjct: 88  KRKTIS 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,734,056
Number of Sequences: 237096
Number of extensions: 1919701
Number of successful extensions: 3428
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3428
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)