Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00813
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...   100   8e-20
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    38   0.26 
UniRef50_Q22SS9 Cluster: ATPase, histidine kinase-, DNA gyrase B...    33   7.5  
UniRef50_Q2U216 Cluster: Predicted protein; n=1; Aspergillus ory...    33   7.5  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 99.5 bits (237), Expect = 8e-20
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +1

Query: 364 LLADPADFVVPQSINKRPKLLYKINLKQTKGIRPTGDTSKEKQNCYFY 507
           +LADPADFVVPQSINKRPK LYKINLKQTKGIR TGDTSKEKQNCYFY
Sbjct: 21  ILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFY 68


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 19/26 (73%), Positives = 19/26 (73%)
 Frame = -1

Query: 616 LKLENG*IDLTNFGLEFFVEVQRRFK 539
           LKLENG  DL NFGLE  VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q22SS9 Cluster: ATPase, histidine kinase-, DNA gyrase B-,
           and HSP90-like domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: ATPase, histidine
           kinase-, DNA gyrase B-, and HSP90-like domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1555

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +1

Query: 352 NSYSLLADPADFVVPQSINKRPKLLYKINLKQTKGIRP--TGDTSKEKQNCYFY 507
           N YS    P  F    S  KR K +   NLKQT   +   TGD+ KE ++ YFY
Sbjct: 438 NEYSNTYSPVKFDTKTSYKKRNKNIQ--NLKQTFQFKKKQTGDSKKELKDKYFY 489


>UniRef50_Q2U216 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 182

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 340 KDDFNSYSLLADPAD-FVVPQSINKRPKLLYKINLKQTKGI 459
           +D F SYS  A PAD    P+ I +   ++YKI L QT G+
Sbjct: 63  EDSFPSYSTFAKPADQTTAPKKIIQWRNIIYKILLDQTIGL 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,219,241
Number of Sequences: 1657284
Number of extensions: 11690752
Number of successful extensions: 22749
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22738
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)