Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00813
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 30 1.5
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 30 1.5
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 30 1.5
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 30 1.5
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 29 2.6
AL021503-1|CAA16420.2| 309|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.1
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 521 FHIYLPFKPSLDFHKKFKTKISQIDSAVLEF 613
F I++PF+P +F K+KT I A+L F
Sbjct: 504 FFIHIPFQPPANFMTKYKTVADPIMRALLRF 534
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 521 FHIYLPFKPSLDFHKKFKTKISQIDSAVLEF 613
F I++PF+P +F K+KT I A+L F
Sbjct: 541 FFIHIPFQPPANFMTKYKTVADPIMRALLRF 571
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 521 FHIYLPFKPSLDFHKKFKTKISQIDSAVLEF 613
F I++PF+P +F K+KT I A+L F
Sbjct: 541 FFIHIPFQPPANFMTKYKTVADPIMRALLRF 571
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 521 FHIYLPFKPSLDFHKKFKTKISQIDSAVLEF 613
F I++PF+P +F K+KT I A+L F
Sbjct: 541 FFIHIPFQPPANFMTKYKTVADPIMRALLRF 571
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 520 MLGINKNNNFVFPLMCPPSDGFLLFVLSL 434
++G+ N++F+ L+CPPS F F+L L
Sbjct: 1638 LIGLLLNSDFIPLLVCPPSQEFYEFLLRL 1666
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 520 MLGINKNNNFVFPLMCPPSDGFLLFVLSL 434
++G+ N++F+ L+CPPS F F+L L
Sbjct: 1638 LIGLLLNSDFIPLLVCPPSQEFYEFLLRL 1666
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 305 WVVIIKKQL*SEKTTSILIHYWL 373
W+V++ KQL ++ T +L HYWL
Sbjct: 108 WLVVVDKQL--QRRTQLLDHYWL 128
>AL021503-1|CAA16420.2| 309|Caenorhabditis elegans Hypothetical
protein Y68A4A.2 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 342 FSLYNCFFIITTQFTKLAFALLITMELCAFFPHPSCTF 229
F+L+N +IIT F L F L + FFP F
Sbjct: 107 FALFNVLYIITQAFHVLIFVLAVERFFLYFFPSSEKVF 144
>Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical
protein F20E11.1 protein.
Length = 331
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 342 FSLYNCFFIITTQFTKLAFALLITMELCAFFP 247
F+L+N +IIT F L F L + FFP
Sbjct: 106 FALFNVLYIITQAFHVLIFVLAVERFFIYFFP 137
>Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical
protein K03D3.14 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 360 IRIEVVFSLYNC-FFIITTQFTKLAFALLITMELCAFFP 247
I+ E + +L C FII F L F++ + LC FFP
Sbjct: 65 IQYESLINLMYCSLFIIDQTFGMLVFSIALEKCLCNFFP 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,010,971
Number of Sequences: 27780
Number of extensions: 297882
Number of successful extensions: 644
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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