Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00812
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 480 FKAFNVMIVLLHSNVLFYENYSQ 548
           F+ FN ++  L   V F  NYSQ
Sbjct: 308 FRMFNAIVTFLIVMVQFETNYSQ 330


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 480 FKAFNVMIVLLHSNVLFYENYSQ 548
           F+ FN ++  L   V F  NYSQ
Sbjct: 628 FRMFNAIVTFLIVMVQFETNYSQ 650


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 595 FYYNFAFLMTNTTC 636
           FY++F FL+  T C
Sbjct: 322 FYWSFGFLIVRTVC 335


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 595 FYYNFAFLMTNTTC 636
           FY++F FL+  T C
Sbjct: 322 FYWSFGFLIVRTVC 335


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 308 KMGCILTNIKSVVTLLLYLRIDHNLIRCHSMFIS 409
           K+G  L+N K  +T     +ID++LI    +FI+
Sbjct: 189 KLGIKLSNDKLEITACRLFKIDNSLILDLLVFIT 222


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 311 FYCSAALTAVIATFVLSLAR 252
           FYC+ +L  + +TF L++ R
Sbjct: 312 FYCAFSLYPLKSTFYLNVVR 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,999
Number of Sequences: 336
Number of extensions: 2996
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)