Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00812
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   7.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 296 QLNSKMGCILTNIKSVVTLLLY 361
           Q+ + MGC   N+K ++  L Y
Sbjct: 254 QVGAFMGCPTRNVKEMIRCLRY 275


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 296 QLNSKMGCILTNIKSVVTLLLY 361
           Q+ + MGC   N+K ++  L Y
Sbjct: 125 QVGAFMGCPTRNVKEMIRCLRY 146


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 296 QLNSKMGCILTNIKSVVTLLLY 361
           Q+ + MGC   N+K ++  L Y
Sbjct: 254 QVGAFMGCPTRNVKEMIRCLRY 275


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 305 CSAALTAVIATFVLSLARQRDCLG 234
           C  ++ AVI  F  S  R+  CLG
Sbjct: 358 CLDSMNAVIRNFNESENRRNSCLG 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,305
Number of Sequences: 438
Number of extensions: 3539
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)