Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00811
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.91 
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    26   1.6  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.8  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.9  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   4.9  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   6.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   6.4  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    23   8.5  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   8.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 145  VEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 252
            ++ A+SNG E+G ++  ED   ++ D +++     N
Sbjct: 1812 LQHADSNGGEDGNEDDDEDDEDDDDDDDDTTTGEGN 1847


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 49  ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 165
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/56 (19%), Positives = 25/56 (44%)
 Frame = +1

Query: 82  PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 249
           PE+     P++    +   ++ +  E+   E   DE+  +   E+ + EE+   +E
Sbjct: 62  PEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAE 117


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 163 NGKENGTDEAPEDSPAENGDAEESNDASENGMPQKRKRL 279
           N   N +  +P+D    +G +  +ND + NG P+   +L
Sbjct: 141 NNNNNNSTTSPQDLSTASGGSSGANDGN-NGRPEISPKL 178


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 43  TMADAAVDKKEVAPEEVTSTEPKESPVKKSP 135
           T    AV      P E+  T+P  SP++ +P
Sbjct: 171 TNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 406 IIYAWFTAMHQCPLEFNSHP 465
           +++  FT   +CPL F+ HP
Sbjct: 1   MLFKLFTIPFRCPLFFSKHP 20


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 241 HRCFLQHHHFQQANLLGLHRYHSL 170
           H     HHH   A+L G H  H++
Sbjct: 504 HHHHHHHHHPTAADLAGYHHQHNV 527


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 193 PEDSPAENGDAEESNDASENGMPQKR 270
           PE  P E G A E     E G+P  R
Sbjct: 300 PEGPPGEPGAASEKGQNGEPGVPGLR 325


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 469 IPLLQMYYTHTDSPYYEGLSSFVSDLSL 552
           + +++MY T  DSPY  G    ++D S+
Sbjct: 132 VEIVEMYLT--DSPYVAGQKLTIADFSI 157


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 460 HPHIPLLQMYYTHTDSPYYEGLSSFVSDLSLGLYNNKY 573
           H H    Q YY    S Y +        +S GLYN  +
Sbjct: 133 HSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNGHH 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,714
Number of Sequences: 2352
Number of extensions: 14994
Number of successful extensions: 46
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)