Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00810
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.6  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 302 DFDIIYKSRLVKILSYEILYFVN 370
           DF+ I+    + I+SY  L+FVN
Sbjct: 195 DFNDIFGISFLLIISYSTLHFVN 217


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 249 TKQQQYIRSRPPYVYANLI 193
           T ++ Y  ++PPY Y +LI
Sbjct: 131 TYRRSYTHAKPPYSYISLI 149


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 QPVIVLNSSCARYYNI 500
           QP++VLNS  A  YN+
Sbjct: 349 QPMLVLNSVSADVYNL 364


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 QPVIVLNSSCARYYNI 500
           QP++VLNS  A  YN+
Sbjct: 349 QPMLVLNSVSADVYNL 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,318
Number of Sequences: 336
Number of extensions: 4063
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)