Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00810
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    29   2.8  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    29   2.8  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     29   2.8  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    29   2.8  
AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z81117-3|CAB03318.1|  334|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AC087081-15|AAK66031.1|  267|Caenorhabditis elegans Hypothetical...    28   6.4  

>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 262 YTYRHKTTTIHSLPTSLRLC*LNKKYFLTYIIRDTENV 149
           Y Y+ ++T+    P   R C L KK+F  YI  DT++V
Sbjct: 624 YFYKQRSTSRSRYPRKFRYCPLIKKHF--YIPADTDDV 659


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 262 YTYRHKTTTIHSLPTSLRLC*LNKKYFLTYIIRDTENV 149
           Y Y+ ++T+    P   R C L KK+F  YI  DT++V
Sbjct: 624 YFYKQRSTSRSRYPRKFRYCPLIKKHF--YIPADTDDV 659


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 262 YTYRHKTTTIHSLPTSLRLC*LNKKYFLTYIIRDTENV 149
           Y Y+ ++T+    P   R C L KK+F  YI  DT++V
Sbjct: 624 YFYKQRSTSRSRYPRKFRYCPLIKKHF--YIPADTDDV 659


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 262 YTYRHKTTTIHSLPTSLRLC*LNKKYFLTYIIRDTENV 149
           Y Y+ ++T+    P   R C L KK+F  YI  DT++V
Sbjct: 624 YFYKQRSTSRSRYPRKFRYCPLIKKHF--YIPADTDDV 659


>AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical
           protein F58H7.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 464 YHGLQSFYVQKHIAGMHASNRNGARQTH*TNN 369
           +HGLQ    Q   AG HASN +G    +  NN
Sbjct: 256 FHGLQGPISQNVQAGTHASNEHGLNSPNGPNN 287


>Z81117-3|CAB03318.1|  334|Caenorhabditis elegans Hypothetical
           protein T06E6.9 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 466 YLIVAALGTTI*VML*FLLKN-SIPNEINSLIVFRLLSDCSFEIRLRFQRI*FQVF*KNK 642
           +L+   LGT   V L FL     +P +I + +VF LL    F   L F+   +Q+F KNK
Sbjct: 68  FLVFPVLGT---VPLGFLTTLFGVPIDIQAYLVFTLLFTVLFSDMLIFENRYYQLFAKNK 124


>AC087081-15|AAK66031.1|  267|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.4 protein.
          Length = 267

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +2

Query: 281 IKYVLLFDFDIIYKSRLVKILSYEILYFVNCLFSESVSRHFCLMHAYQRCVFVHKTTATR 460
           IKY + F  DI+   +   I   E  Y +N  + E +  HF     Y     +   T  R
Sbjct: 141 IKYTVKFLMDILKAQKCAHIKKIEFSYSINSKYIEHLF-HFVSFQIYMSDFSIKTATQIR 199

Query: 461 DS 466
           D+
Sbjct: 200 DN 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,313,206
Number of Sequences: 27780
Number of extensions: 360199
Number of successful extensions: 792
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)