Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00809
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7ZYB6 Cluster: Sdhb-prov protein; n=7; cellular organi... 151 2e-35
UniRef50_P21912 Cluster: Succinate dehydrogenase [ubiquinone] ir... 150 4e-35
UniRef50_P21914 Cluster: Succinate dehydrogenase [ubiquinone] ir... 150 4e-35
UniRef50_Q9ZEA1 Cluster: Succinate dehydrogenase iron-sulfur sub... 136 5e-31
UniRef50_A0DM52 Cluster: Chromosome undetermined scaffold_56, wh... 132 9e-30
UniRef50_UPI00015B507A Cluster: PREDICTED: similar to succinate ... 126 4e-28
UniRef50_Q9FJP9 Cluster: Succinate dehydrogenase [ubiquinone] ir... 118 1e-25
UniRef50_UPI0000DB6ECF Cluster: PREDICTED: similar to Succinate ... 117 3e-25
UniRef50_Q8DFP8 Cluster: Succinate dehydrogenase; n=39; Gammapro... 113 6e-24
UniRef50_Q5DM51 Cluster: Hydrogenosomal succinate dehydrogenase ... 112 1e-23
UniRef50_A0KVX3 Cluster: Succinate dehydrogenase and fumarate re... 109 7e-23
UniRef50_P51053 Cluster: Succinate dehydrogenase iron-sulfur sub... 108 1e-22
UniRef50_Q9G8R9 Cluster: Succinate:cytochrome c oxidoreductase s... 107 2e-22
UniRef50_Q5DAK2 Cluster: SJCHGC06828 protein; n=1; Schistosoma j... 100 7e-20
UniRef50_Q4QF85 Cluster: Succinate dehydrogenase, putative; n=6;... 91 3e-17
UniRef50_Q9RVS1 Cluster: Succinate dehydrogenase, iron-sulfur su... 81 4e-14
UniRef50_A0LK34 Cluster: Succinate dehydrogenase and fumarate re... 74 4e-12
UniRef50_Q3VV73 Cluster: Succinate dehydrogenase/fumarate reduct... 69 2e-10
UniRef50_Q1PUX3 Cluster: Similar to succinate dehydrogenase/fuma... 65 1e-09
UniRef50_Q67L21 Cluster: Succinate dehydrogenase iron-sulfur pro... 64 3e-09
UniRef50_Q0LGY5 Cluster: Succinate dehydrogenase and fumarate re... 62 2e-08
UniRef50_Q8ZYL9 Cluster: Succinate dehydrogenase iron-sulfur sub... 58 3e-07
UniRef50_A6Q2U4 Cluster: Succinate dehydrogenase/fumarate reduct... 56 1e-06
UniRef50_Q3AFZ8 Cluster: Fumarate reductase, iron-sulfur subunit... 55 2e-06
UniRef50_Q12ZL3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;... 54 3e-06
UniRef50_Q8G5R5 Cluster: Probable iron sulfur protein associated... 54 5e-06
UniRef50_Q9C4L8 Cluster: Succinate dehydrogenase complex subunit... 54 5e-06
UniRef50_A6Q0W9 Cluster: Succinate dehydrogenase/fumarate reduct... 53 6e-06
UniRef50_A0RY99 Cluster: Succinate dehydrogenase/fumarate reduct... 53 9e-06
UniRef50_A7D294 Cluster: Succinate dehydrogenase and fumarate re... 52 2e-05
UniRef50_A6Q9J7 Cluster: Succinate dehydrogenase/fumarate reduct... 51 3e-05
UniRef50_Q9YDG7 Cluster: Succinate dehydrogenase subunit B; n=2;... 49 1e-04
UniRef50_O29575 Cluster: Succinate dehydrogenase, iron-sulfur su... 48 2e-04
UniRef50_P44893 Cluster: Fumarate reductase iron-sulfur subunit;... 47 6e-04
UniRef50_Q5V347 Cluster: Succinate dehydrogenase iron-sulfur pro... 46 0.001
UniRef50_Q10761 Cluster: Fumarate reductase iron-sulfur subunit;... 46 0.001
UniRef50_A0L4R2 Cluster: Succinate dehydrogenase and fumarate re... 46 0.001
UniRef50_Q97AQ2 Cluster: Succinate dehydrogenase iron sulfur sub... 45 0.002
UniRef50_A6Q6K2 Cluster: Succinate dehydrogenase/fumarate reduct... 45 0.002
UniRef50_Q8KAW0 Cluster: Succinate/fumarate oxidoreductase, iron... 44 0.003
UniRef50_Q2JIV5 Cluster: Succinate dehydrogenase/fumarate reduct... 44 0.003
UniRef50_Q0RXW4 Cluster: Succinate dehydrogenase Fe-S protein su... 44 0.003
UniRef50_Q28K79 Cluster: Succinate dehydrogenase and fumarate re... 43 0.007
UniRef50_A6DAI5 Cluster: Fumarate reductase, iron-sulfur subunit... 43 0.007
UniRef50_Q39YX0 Cluster: Succinate dehydrogenase/fumarate reduct... 41 0.028
UniRef50_A1RZ94 Cluster: Succinate dehydrogenase and fumarate re... 41 0.037
UniRef50_Q6LYC4 Cluster: Uncharacterized iron-sulfur protein MMP... 41 0.037
UniRef50_Q3ACD2 Cluster: Fumarate reductase, iron-sulfur subunit... 40 0.049
UniRef50_O66828 Cluster: Fumarate reductase iron-sulfur subunit;... 40 0.049
UniRef50_UPI00015BB01D Cluster: succinate dehydrogenase subunit ... 40 0.064
UniRef50_A6FPW4 Cluster: Succinate dehydrogenase and fumarate re... 40 0.085
UniRef50_P17596 Cluster: Fumarate reductase iron-sulfur subunit;... 39 0.11
UniRef50_Q7M826 Cluster: SUCCINATE DEHYDROGENASE IRON-SULFUR PRO... 39 0.15
UniRef50_A7BWP3 Cluster: Succinate dehydrogenase/fumarate reduct... 38 0.20
UniRef50_A3CS04 Cluster: Succinate dehydrogenase and fumarate re... 38 0.20
UniRef50_Q9PJE9 Cluster: Succinate dehydrogenase, iron-sulfur pr... 38 0.26
UniRef50_Q8ZXH5 Cluster: Glycolate oxidase subunit glcF; n=3; Py... 38 0.34
UniRef50_Q0BRV1 Cluster: Hypothetical membrane associated protei... 37 0.45
UniRef50_O06914 Cluster: Fumarate reductase iron-sulfur subunit;... 37 0.60
UniRef50_Q94GJ7 Cluster: Putative polyprotein; n=1; Oryza sativa... 36 0.79
UniRef50_A1WKV3 Cluster: Succinate dehydrogenase and fumarate re... 36 1.0
UniRef50_Q1QFA8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q5CPG0 Cluster: Zfwd1 protein, CCCH like RNA binding do... 36 1.4
UniRef50_A7BA75 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A4J5E9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_O53142 Cluster: Thiol:fumarate reductase subunit B prot... 35 2.4
UniRef50_O66892 Cluster: Fumarate reductase iron-sulfur subunit;... 34 3.2
UniRef50_A7I4E8 Cluster: Succinate dehydrogenase and fumarate re... 34 3.2
UniRef50_A2BMI3 Cluster: Fe-S oxidoreductase; n=1; Hyperthermus ... 34 4.2
UniRef50_P52074 Cluster: Glycolate oxidase iron-sulfur subunit; ... 34 4.2
UniRef50_Q5P537 Cluster: Electron transport complex protein rnfC... 33 5.6
UniRef50_A6CBN0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A0CDA0 Cluster: Chromosome undetermined scaffold_17, wh... 33 5.6
UniRef50_Q0AZ32 Cluster: Putative iron-sulfur-binding reductase;... 33 7.4
UniRef50_A6DLY9 Cluster: Glycolate oxidase iron-sulfur subunit; ... 33 7.4
UniRef50_Q4JBT7 Cluster: 4Fe-4S binding domain protein; n=4; Sul... 33 7.4
UniRef50_Q52716 Cluster: Electron transport complex protein rnfC... 33 7.4
UniRef50_UPI0000498AA2 Cluster: long-chain-fatty-acid--CoA ligas... 33 9.7
UniRef50_Q72JM0 Cluster: Iron-sulfur binding reductase, putative... 33 9.7
UniRef50_Q21I18 Cluster: Electron transport complex, RnfABCDGE t... 33 9.7
UniRef50_Q0YKK5 Cluster: Putative uncharacterized protein; n=2; ... 33 9.7
UniRef50_A5N696 Cluster: Predicted succinate dehydrogenase iron-... 33 9.7
UniRef50_A3QGY2 Cluster: 3-hydroxyacyl-CoA dehydrogenase, NAD-bi... 33 9.7
UniRef50_A2BMS4 Cluster: Predicted Fe-S oxidoreductase; n=2; Des... 33 9.7
>UniRef50_Q7ZYB6 Cluster: Sdhb-prov protein; n=7; cellular
organisms|Rep: Sdhb-prov protein - Xenopus laevis
(African clawed frog)
Length = 282
Score = 151 bits (366), Expect = 2e-35
Identities = 65/85 (76%), Positives = 78/85 (91%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GKE Q LQ +EDR KLDGLYEC+LCACCSTSCPSYWWN DKYLGPA
Sbjct: 154 SIEPYLKKKDESQQGKE-QYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPA 212
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RLSKL+
Sbjct: 213 VLMQAYRWMIDSRDDFTEERLSKLQ 237
Score = 74.9 bits (176), Expect = 2e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLS 363
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++
Sbjct: 231 ERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 273
>UniRef50_P21912 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial precursor; n=276;
cellular organisms|Rep: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial
precursor - Homo sapiens (Human)
Length = 280
Score = 150 bits (363), Expect = 4e-35
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 152 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQ 235
Score = 76.6 bits (180), Expect = 6e-13
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 229 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 280
>UniRef50_P21914 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial precursor; n=71;
cellular organisms|Rep: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial
precursor - Drosophila melanogaster (Fruit fly)
Length = 297
Score = 150 bits (363), Expect = 4e-35
Identities = 65/86 (75%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGK-ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
+I+PWLQR+NEA + K + Q LQ VEDR KLDGLYEC+LCACCSTSCPSYWWN +KYLGP
Sbjct: 159 NIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGP 218
Query: 179 AVLMQAYRWIIDSRDEATEKRLSKLR 256
AVLMQAYRWIIDSRDE + +RL+KL+
Sbjct: 219 AVLMQAYRWIIDSRDENSAERLNKLK 244
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIMDPAGLQK 414
E K +D +SVYRCHTIMNCTRTCPKGLNPGRAIA+IK LLSG+ K P ++ A L K
Sbjct: 238 ERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
>UniRef50_Q9ZEA1 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=121; cellular organisms|Rep: Succinate
dehydrogenase iron-sulfur subunit - Rickettsia
prowazekii
Length = 261
Score = 136 bits (329), Expect = 5e-31
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEPWL+ ++ A E LQ ++DR KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 138 SIEPWLKNDSPAPSNSER--LQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 195
Query: 182 VLMQAYRWIIDSRDEATEKRLSKL 253
+L+QAYRWI DSRD+ T RL L
Sbjct: 196 ILLQAYRWIADSRDDNTGARLEAL 219
Score = 64.9 bits (151), Expect = 2e-09
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +1
Query: 253 QDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLS 363
+D + +YRCHTIMNCT+TCPKGLNP +AI ++K L++
Sbjct: 220 EDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNLIA 256
>UniRef50_A0DM52 Cluster: Chromosome undetermined scaffold_56, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_56, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 305
Score = 132 bits (319), Expect = 9e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+I+P+L+R+ KE +Q VEDR LDGLYECVLCACCSTSCPSYWW+ D+YLGPA
Sbjct: 175 TIDPYLKRKTPKEGNKE--YIQSVEDRKLLDGLYECVLCACCSTSCPSYWWHPDRYLGPA 232
Query: 182 VLMQAYRWIIDSRDEATEKRLSKL 253
VLMQAYRWI+DSRDE T++RL KL
Sbjct: 233 VLMQAYRWIVDSRDEYTDERLEKL 256
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLL 360
E K + V C I C+ TCPKGL+P R++ + L+
Sbjct: 251 ERLEKLAEDVKVEDCQNIGMCSFTCPKGLDPQRSMNHLMKLI 292
>UniRef50_UPI00015B507A Cluster: PREDICTED: similar to succinate
dehydrogenase iron-protein subunit; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to succinate
dehydrogenase iron-protein subunit - Nasonia vitripennis
Length = 538
Score = 126 bits (305), Expect = 4e-28
Identities = 54/84 (64%), Positives = 64/84 (76%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+P+L+R E QL+Q DR K+DGLYEC+LC CCS +CP YWW G+KYLGPAV
Sbjct: 391 IDPYLKRPQEHDFVGMRQLMQSERDRAKIDGLYECILCGCCSYACPPYWWAGEKYLGPAV 450
Query: 185 LMQAYRWIIDSRDEATEKRLSKLR 256
LMQAYRWIIDSRD+ E+RL KLR
Sbjct: 451 LMQAYRWIIDSRDQTHEERLGKLR 474
Score = 81.8 bits (193), Expect = 2e-14
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +1
Query: 226 SH*ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIMD 396
+H E K +D +SV+RCHTI NCT+TCPKGLNPGRAIA++K L++GI K+ P M+
Sbjct: 465 THEERLGKLRDFFSVFRCHTIFNCTKTCPKGLNPGRAIAELKRLVTGITDKEKPDME 521
>UniRef50_Q9FJP9 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit 3, mitochondrial precursor; n=5;
Magnoliophyta|Rep: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit 3, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 309
Score = 118 bits (285), Expect = 1e-25
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
S+EPWL+ G+E + Q +DR KLDGLYEC+LCACC+TSCPSYWWN +++ GPA
Sbjct: 179 SMEPWLKTRKPPKDGREHR--QSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPA 236
Query: 182 VLMQAYRWIIDSRDEATEKRLSKL 253
L+QAYRWI DSRDE E+RL +
Sbjct: 237 ALLQAYRWISDSRDEYREERLQAI 260
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 250 TQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKT 354
T+ VYRC I NCT TCPKGLNP AI ++K+
Sbjct: 261 TESETKVYRCRAIKNCTATCPKGLNPASAILKMKS 295
>UniRef50_UPI0000DB6ECF Cluster: PREDICTED: similar to Succinate
dehydrogenase B CG3283-PA; n=2; Apis mellifera|Rep:
PREDICTED: similar to Succinate dehydrogenase B
CG3283-PA - Apis mellifera
Length = 337
Score = 117 bits (282), Expect = 3e-25
Identities = 50/87 (57%), Positives = 65/87 (74%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+IEP+L+R E Q+LQ DR KL+GLYEC+LC CC+ +CP YWW GDK+LGP+
Sbjct: 188 NIEPFLKRTGEDNYVGLRQILQSPRDRDKLNGLYECILCGCCTFACPPYWWLGDKFLGPS 247
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLRTH 262
L+QAYRWIIDSRD ++RL+KLR +
Sbjct: 248 TLLQAYRWIIDSRDMGHKERLTKLRDY 274
Score = 86.2 bits (204), Expect = 7e-16
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +1
Query: 229 H*ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPP 387
H E K +D YSVYRCHTI NCT+TCPKGLNPG+A+AQIK LL+G+ KK P
Sbjct: 264 HKERLTKLRDYYSVYRCHTIFNCTKTCPKGLNPGKAVAQIKRLLAGLAKKDRP 316
>UniRef50_Q8DFP8 Cluster: Succinate dehydrogenase; n=39;
Gammaproteobacteria|Rep: Succinate dehydrogenase -
Vibrio vulnificus
Length = 236
Score = 113 bits (271), Expect = 6e-24
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++P+L + +E LQ ++R LDGLYEC++CACC+TSCPS+WWN DK++GPA
Sbjct: 115 VKPFLISDGALPPSREN--LQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAG 172
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
L+ AYRW+IDSRD AT++RLS L
Sbjct: 173 LLAAYRWLIDSRDTATDERLSNL 195
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLL 360
E D +SV+RCH IMNC CPKGLNP +AI IK++L
Sbjct: 190 ERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSML 231
>UniRef50_Q5DM51 Cluster: Hydrogenosomal succinate dehydrogenase
beta subunit; n=3; Spirotrichea|Rep: Hydrogenosomal
succinate dehydrogenase beta subunit - Nyctotherus
ovalis
Length = 320
Score = 112 bits (269), Expect = 1e-23
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+P L+R+ + E + Q +E+R K+DGLYECVLC CS+SCPSYWW+ ++YLGPA+
Sbjct: 187 IQPHLKRKT-LKQPNEKEYHQSIEERAKIDGLYECVLCLSCSSSCPSYWWHSNEYLGPAI 245
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
L QA+RW+IDSRDE E+RL L
Sbjct: 246 LQQAFRWVIDSRDEYKEERLEML 268
>UniRef50_A0KVX3 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=15; cellular
organisms|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Shewanella sp. (strain
ANA-3)
Length = 235
Score = 109 bits (262), Expect = 7e-23
Identities = 48/83 (57%), Positives = 65/83 (78%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+P+L + E + +E LQ E R LDGLYEC++CACCST+CPS+WWN DK++GP+
Sbjct: 115 IKPFLIND-EKMPAREH--LQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSG 171
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
L+ AYR++IDSRD ATE+RLS+L
Sbjct: 172 LLHAYRFLIDSRDTATEERLSEL 194
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLL 360
E + D YSV+RCH IMNC CPKGLNP +AI IK++L
Sbjct: 189 ERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSML 230
>UniRef50_P51053 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=32; Proteobacteria|Rep: Succinate
dehydrogenase iron-sulfur subunit - Coxiella burnetii
Length = 235
Score = 108 bits (260), Expect = 1e-22
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++P+L + EA + + LQ E+R KLDGLYEC+LCACCS+SCPSYWWN DK++GPA
Sbjct: 112 VKPYLLNDQEA---PQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAG 168
Query: 185 LMQAYRWIIDSRDEATEKRLSKLR 256
L+ +YR+I DSRD ++RL ++
Sbjct: 169 LLWSYRFIADSRDSKEKERLDAMK 192
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +1
Query: 253 QDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKT 354
+D YSV+RC TIM+C CPK LNP +AI +I+T
Sbjct: 192 KDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRT 225
>UniRef50_Q9G8R9 Cluster: Succinate:cytochrome c oxidoreductase
subunit 2; n=1; Naegleria gruberi|Rep:
Succinate:cytochrome c oxidoreductase subunit 2 -
Naegleria gruberi
Length = 270
Score = 107 bits (258), Expect = 2e-22
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 77 DRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSKL 253
DR L+GLYEC+LCACCSTSCPSYWWN D+YLGPA+L+Q+YRW+IDSRD+ RL +L
Sbjct: 171 DRYLLNGLYECILCACCSTSCPSYWWNKDRYLGPAILLQSYRWLIDSRDDFFFSRLGQL 229
Score = 52.8 bits (121), Expect = 9e-06
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 256 DTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLS 363
D Y V RCH+I+NC CPKGLNP AI IK L++
Sbjct: 231 DVYKVGRCHSILNCVSCCPKGLNPAEAINNIKLLIN 266
>UniRef50_Q5DAK2 Cluster: SJCHGC06828 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06828 protein - Schistosoma
japonicum (Blood fluke)
Length = 126
Score = 99.5 bits (237), Expect = 7e-20
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = +2
Query: 5 IEPWLQREN--EAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
IEP+L+++N E GK+T Q VEDR KLDGLYEC+LCACC TSCP YW NGDKYLGP
Sbjct: 11 IEPYLKKKNVTEEDFGKKTYY-QSVEDRAKLDGLYECLLCACCFTSCPFYWGNGDKYLGP 69
Query: 179 AVLMQAYR 202
AVL+ YR
Sbjct: 70 AVLLPGYR 77
>UniRef50_Q4QF85 Cluster: Succinate dehydrogenase, putative; n=6;
Trypanosomatidae|Rep: Succinate dehydrogenase, putative
- Leishmania major
Length = 197
Score = 90.6 bits (215), Expect = 3e-17
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +2
Query: 68 DVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLS 247
D +R++L+GLYECVLCA C+ SCP YWWN + +LGPAVL+Q+YRW+++ D ++R+
Sbjct: 69 DSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVR 128
Query: 248 KLRTHTL 268
T L
Sbjct: 129 MFETGNL 135
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIMD 396
V CH I NC+ TCPK LNPG A +IK L S K+ P ++
Sbjct: 136 VNMCHNIFNCSITCPKFLNPGLASKEIKRLSSPSTKRVGPAIE 178
>UniRef50_Q9RVS1 Cluster: Succinate dehydrogenase, iron-sulfur
subunit; n=39; Bacteria|Rep: Succinate dehydrogenase,
iron-sulfur subunit - Deinococcus radiodurans
Length = 264
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+I P+ E+ A G+ Q E ++ C+LCACC+TSCP +W NG YLGPA
Sbjct: 144 AIMPYFINEDPAPAGERLQSEAQAE---RMAHSSNCILCACCTTSCPIFWVNGS-YLGPA 199
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLRTHT 265
++QA+R+I DSRD+AT++RL+ + +T
Sbjct: 200 AIVQAHRFIFDSRDQATQQRLNIMNQNT 227
>UniRef50_A0LK34 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 237
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 50 ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
E + Q EDR K+D + C+LCACC+ SCP N +KY+GPA L+ AYR+I D+RD+
Sbjct: 126 EAERQQSPEDRKKVDDVIRCILCACCTGSCPVMIQN-EKYVGPAALVWAYRFIFDTRDDR 184
Query: 230 TEKRLSKLRTH 262
+RL ++ H
Sbjct: 185 YAERLKQIDFH 195
>UniRef50_Q3VV73 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=3; Bacteroidetes/Chlorobi
group|Rep: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein - Prosthecochloris aestuarii DSM 271
Length = 292
Score = 68.5 bits (160), Expect = 2e-10
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +2
Query: 50 ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
+ + LQ + K++ +C+LC C+ +CP+ W N YLGPA L++AYR+I DSRD+A
Sbjct: 187 DKERLQSPAEHKKIEESTKCILCGACTHACPTTWANAT-YLGPAALLKAYRFIFDSRDQA 245
Query: 230 TEKRLSKL 253
T +R+ ++
Sbjct: 246 TGQRIERI 253
>UniRef50_Q1PUX3 Cluster: Similar to succinate
dehydrogenase/fumarate reductase (Chain B) of E.coli;
n=1; Candidatus Kuenenia stuttgartiensis|Rep: Similar to
succinate dehydrogenase/fumarate reductase (Chain B) of
E.coli - Candidatus Kuenenia stuttgartiensis
Length = 240
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 50 ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
E + +Q ++R KL+GL +C+LCACC +SCP + D YLGP + R++ DSRD A
Sbjct: 131 EGEQIQSTDERSKLNGLIDCILCACCHSSCPITAMHED-YLGPMSFLNIDRFVSDSRDGA 189
Query: 230 TEKRLS 247
++RL+
Sbjct: 190 RQERLA 195
Score = 40.7 bits (91), Expect = 0.037
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIK 351
V+RCH++ NC CPK LNP +I +K
Sbjct: 203 VWRCHSVFNCQEVCPKDLNPTGSITSLK 230
>UniRef50_Q67L21 Cluster: Succinate dehydrogenase iron-sulfur
protein; n=1; Symbiobacterium thermophilum|Rep:
Succinate dehydrogenase iron-sulfur protein -
Symbiobacterium thermophilum
Length = 243
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++PWL +N E + LQ EDR K + +C+LC C +SCPS N ++YLGP
Sbjct: 120 VKPWLINDNPP---PERERLQSPEDRAKYNMEIDCILCGACFSSCPS-GANNEEYLGPHA 175
Query: 185 LMQAYRWIIDSRDEATEKRL 244
L+ A R+ D+RD A +RL
Sbjct: 176 LVWASRFFHDTRDTAKRERL 195
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 262 YSVYRCHTIMNCTRTCPKGLNPGRAIAQIK 351
Y V+RCHTI NC CPK +NP AI ++K
Sbjct: 202 YGVFRCHTIFNCVEACPKHINPTEAIQKLK 231
>UniRef50_Q0LGY5 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Herpetosiphon
aurantiacus ATCC 23779
Length = 250
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +2
Query: 44 GKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRD 223
GKE LQ +D ++ C C CC+++CP +W NG+ Y GP+ L +AYR++ DSRD
Sbjct: 128 GKER--LQSPKDANRIALAASCNQCGCCTSACPVHWSNGE-YYGPSALTRAYRFVEDSRD 184
Query: 224 EATEKRLSKLRTHT 265
A + RL + + T
Sbjct: 185 TAIKARLDIVGSET 198
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIK 351
V+RCHT+ NC+ CPK + G I +K
Sbjct: 200 VWRCHTVFNCSE-CPKSIPNGENIQALK 226
>UniRef50_Q8ZYL9 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=4; Thermoproteaceae|Rep: Succinate
dehydrogenase iron-sulfur subunit - Pyrobaculum
aerophilum
Length = 237
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+++P++ R+ + + + + Q ED K C+ C C +CP N +K+LGP
Sbjct: 112 AVKPYIIRDVKEIYESDVEFGQKPEDLEKYYNFAYCIQCGLCMAACPILGSN-EKFLGPM 170
Query: 182 VLMQAYRWIIDSRDEATEKR 241
L AYRW DSRD E+R
Sbjct: 171 ALNAAYRWSADSRDRGWEER 190
Score = 36.3 bits (80), Expect = 0.79
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 244 IKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLL 360
I T+D V+ CH C+ CP+G++PG AI +K +
Sbjct: 194 IDTED--GVWPCHLAYTCSAVCPRGVDPGYAIQLLKATI 230
>UniRef50_A6Q2U4 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=3;
Epsilonproteobacteria|Rep: Succinate
dehydrogenase/fumarate reductase, iron-sulfur protein -
Nitratiruptor sp. (strain SB155-2)
Length = 318
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+++PWL+ E + E + ++ KL+ C+ C CC +CP N D YLGPA
Sbjct: 116 TVKPWLEAEIDEHPAMENII--PPKEAEKLEEADYCIQCGCCYYACPVVEVNED-YLGPA 172
Query: 182 VLMQAYRWIIDSRDEATEKRL 244
+AYR+ D RD A ++RL
Sbjct: 173 AFEKAYRFTADVRDNAKKERL 193
>UniRef50_Q3AFZ8 Cluster: Fumarate reductase, iron-sulfur subunit;
n=2; Clostridiales|Rep: Fumarate reductase, iron-sulfur
subunit - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 317
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++PWL +E KET Q E+ K++ +C+LC CC++ C N +L P +
Sbjct: 116 VKPWLIPRDEF--SKETGCRQTPEEFKKINKNSDCILCGCCASECNKLSNNDSDFLEPFI 173
Query: 185 LMQAYRWIIDSRDEATEKRLS 247
+A ++I DSRD+ R+S
Sbjct: 174 FSKAQKFIADSRDKDPLSRIS 194
>UniRef50_Q12ZL3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;
n=1; Methanococcoides burtonii DSM 6242|Rep: 4Fe-4S
ferredoxin, iron-sulfur binding - Methanococcoides
burtonii (strain DSM 6242)
Length = 180
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+PWL+ + E V KE L D + +VK++ C+LCA C SCP +Y GPA
Sbjct: 72 IKPWLEMK-ENVPEKEN--LIDRDTQVKIEQYTNCILCALCHGSCP-VAAKDKQYYGPAA 127
Query: 185 LMQAYRWIIDSRDEATEKR 241
L +A+R+ +D R++ K+
Sbjct: 128 LAKAWRFYLDPREKEESKQ 146
>UniRef50_Q8G5R5 Cluster: Probable iron sulfur protein associated
with succinate dehydrogenase/fumarate reductase; n=3;
Bifidobacterium|Rep: Probable iron sulfur protein
associated with succinate dehydrogenase/fumarate
reductase - Bifidobacterium longum
Length = 321
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 56 QLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATE 235
+ LQ+ E K + L C+ C C +CP Y GD ++GPA L+ A R++ DSRD
Sbjct: 218 EYLQNPEQLAKYELLSNCIACGVCEGACPVYA-GGDAFIGPAALIWASRFVNDSRDTKAM 276
Query: 236 KRLSKLRT 259
+R+ + T
Sbjct: 277 ERMDAIDT 284
>UniRef50_Q9C4L8 Cluster: Succinate dehydrogenase complex subunit B;
n=9; Archaea|Rep: Succinate dehydrogenase complex
subunit B - Sulfolobus tokodaii
Length = 320
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++P L E ++G Q L+ ED+ +L +C+ C C ++CPS + + +LGPA
Sbjct: 123 VKPRLYPHKEVLEGNVEQRLKP-EDQRELWKFAQCIWCGLCVSACPSVKMDPE-FLGPAA 180
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
+ YR++ D RD TE+R+ L
Sbjct: 181 HAKGYRFLADPRDTITEERMKIL 203
>UniRef50_A6Q0W9 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=2;
Epsilonproteobacteria|Rep: Succinate
dehydrogenase/fumarate reductase, iron-sulfur protein -
Nitratiruptor sp. (strain SB155-2)
Length = 234
Score = 53.2 bits (122), Expect = 6e-06
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +2
Query: 104 ECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRL 244
+C+LC C +SCP Y N D +LGP L +AYR++ID+R+E ++ +
Sbjct: 131 DCILCQSCYSSCPVYETN-DSFLGPFALTRAYRYVIDAREEEKKEHI 176
>UniRef50_A0RY99 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=2; Thermoprotei|Rep: Succinate
dehydrogenase/fumarate reductase iron-sulfur protein -
Cenarchaeum symbiosum
Length = 258
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +2
Query: 5 IEPWLQREN-----EAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKY 169
++P++ EN E V G E + LQ E+ K C+ C C+++CP+ + +
Sbjct: 132 VKPYIMDENGDMGAEPVDG-ERETLQSPEELEKFIQFSGCIKCGLCNSACPTMTTDSS-F 189
Query: 170 LGPAVLMQAYRWIIDSRDEATEKRLSKL 253
GP L QAYR++ DSRD+ ++R ++
Sbjct: 190 TGPQALTQAYRYMADSRDKGADERTKEV 217
Score = 39.1 bits (87), Expect = 0.11
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 247 KTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVK 375
+ +++ V+RCH +C++ CPKG++P I ++ + G K
Sbjct: 216 EVDESHGVWRCHFAGSCSKVCPKGVDPAMGIQLLRGYMLGFKK 258
>UniRef50_A7D294 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Succinate dehydrogenase
and fumarate reductase iron-sulfur protein - Halorubrum
lacusprofundi ATCC 49239
Length = 296
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
++EP+ Q NE G+ + Q E+R K+ C+ C+ C +SC + ++YLGPA
Sbjct: 169 AVEPYFQT-NEYPDGELEEQRQTRENREKIKMSTRCIWCSACMSSC-NIAAGDNEYLGPA 226
Query: 182 VLMQAYRWIIDSR--DEATEKRL 244
+ +AYR+ +D R +E +KRL
Sbjct: 227 AINKAYRFAMDEREGEEIKQKRL 249
>UniRef50_A6Q9J7 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=1; Sulfurovum sp.
NBC37-1|Rep: Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein - Sulfurovum sp. (strain NBC37-1)
Length = 329
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 107 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRL 244
C+ C C SCP+ N D YLGPA L AYR+ +D+RD A ++RL
Sbjct: 153 CIQCGACHYSCPALEANPD-YLGPAALNAAYRFTVDTRDHAGKERL 197
>UniRef50_Q9YDG7 Cluster: Succinate dehydrogenase subunit B; n=2;
Desulfurococcales|Rep: Succinate dehydrogenase subunit B
- Aeropyrum pernix
Length = 305
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 107 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRL 244
C+ C C +CP + + K+LGP L QAYR+++D RDE +RL
Sbjct: 165 CIACGLCVAACPIFA-SDTKFLGPQALSQAYRFVVDPRDEGYVERL 209
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIKTLL 360
V+ CH +C+ CPK ++P AI ++++LL
Sbjct: 218 VFGCHFAASCSAVCPKEVDPAGAIQRLRSLL 248
>UniRef50_O29575 Cluster: Succinate dehydrogenase, iron-sulfur
subunit B; n=1; Archaeoglobus fulgidus|Rep: Succinate
dehydrogenase, iron-sulfur subunit B - Archaeoglobus
fulgidus
Length = 236
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
+++P+L R+++ + +LLQ E+ + C+ C C + CP+ D YLGPA
Sbjct: 108 AVKPYLIRKDDNY-AEPKELLQTPEELNEYYVFTLCIKCGACYSVCPAAA-TLDGYLGPA 165
Query: 182 VLMQAYRWIIDSRDEATEKR 241
+ AYR+ DSRD+ +R
Sbjct: 166 AMTAAYRFCADSRDDGQRER 185
Score = 37.1 bits (82), Expect = 0.45
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIK 351
V+RCH M C+ CPK + P +A+ ++
Sbjct: 195 VWRCHLAMECSEVCPKNVEPAKAVQMLR 222
>UniRef50_P44893 Cluster: Fumarate reductase iron-sulfur subunit;
n=113; Proteobacteria|Rep: Fumarate reductase
iron-sulfur subunit - Haemophilus influenzae
Length = 256
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 107 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSKL 253
C+ C C +CP + N + +LGPA + A+R+ +D+RD KR+S L
Sbjct: 160 CINCGLCYAACPQFGLNPE-FLGPAAITMAHRYNLDNRDHGKAKRMSLL 207
>UniRef50_Q5V347 Cluster: Succinate dehydrogenase iron-sulfur
protein subunit; n=5; Halobacteriaceae|Rep: Succinate
dehydrogenase iron-sulfur protein subunit - Haloarcula
marismortui (Halobacterium marismortui)
Length = 295
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
++EP+ + E K + Q E+R K+ C+ C C +SC + ++YLGPA
Sbjct: 168 AVEPYFDAD-ETPDDKLEEQRQTRENREKVKMSTRCIWCGACMSSC-NIAAGDNEYLGPA 225
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
+ +AYR+ +D R E ++ +LR
Sbjct: 226 AINKAYRFAMDER-EGENRKQERLR 249
>UniRef50_Q10761 Cluster: Fumarate reductase iron-sulfur subunit;
n=19; Bacteria|Rep: Fumarate reductase iron-sulfur
subunit - Mycobacterium tuberculosis
Length = 247
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 2 SIEPWLQRENEA-VKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
S++PWL R +E V+ E + D K + C+ C C ++CP Y + D +LGP
Sbjct: 115 SVKPWLVRHDEPPVEDGEYRQTPAELDAFKQFSM--CINCMLCYSACPVYALDPD-FLGP 171
Query: 179 AVLMQAYRWIIDSRDEATEKR 241
A + R+ +DSRD+ R
Sbjct: 172 AAIALGQRYNLDSRDQGAADR 192
>UniRef50_A0L4R2 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Magnetococcus sp.
MC-1|Rep: Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Magnetococcus sp. (strain MC-1)
Length = 328
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+P+LQ E+ T++ D+V + + +C++CACC + C + D ++GPA
Sbjct: 121 IKPYLQEGAESA----TEVNDTAFDQV--NHVTQCIMCACCFSDCTMAEVS-DAFIGPAA 173
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
L +A+R++ D R+ +RL L
Sbjct: 174 LAKAFRFVSDPREGNKRERLRVL 196
>UniRef50_Q97AQ2 Cluster: Succinate dehydrogenase iron sulfur
subunit; n=4; Archaea|Rep: Succinate dehydrogenase iron
sulfur subunit - Thermoplasma volcanium
Length = 240
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
++P++ R+++ KE L Q E + C+ C C +CP + YLGPA
Sbjct: 114 VKPYVIRDDDGKYDKE--LSQTPEQFHEYANYAMCIKCGLCMAACPIEG-SDPSYLGPAP 170
Query: 185 LMQAYRWIIDSRDEATEKRL 244
L A+R+I D+RD+ + R+
Sbjct: 171 LAAAWRYIADNRDKGAKYRV 190
Score = 36.3 bits (80), Expect = 0.79
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 274 RCHTIMNCTRTCPKGLNPGRAIAQIK 351
RCH CT CPKG+NP AI +++
Sbjct: 201 RCHFAGECTEVCPKGVNPSFAIQKLR 226
>UniRef50_A6Q6K2 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=1; Sulfurovum sp.
NBC37-1|Rep: Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein - Sulfurovum sp. (strain NBC37-1)
Length = 243
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 74 EDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSKL 253
ED + + +C+LC C ++CP + N D +LGP L +AYR+ D R+ + + +
Sbjct: 117 EDEKRTEKQTDCILCDSCYSACPVFAVNPD-FLGPFALTRAYRYSEDKREGDAKTIIDNV 175
Query: 254 RTHTL--CTV 277
+T+ + CT+
Sbjct: 176 QTNGVWDCTL 185
>UniRef50_Q8KAW0 Cluster: Succinate/fumarate oxidoreductase,
iron-sulfur protein, putative; n=10; Chlorobiaceae|Rep:
Succinate/fumarate oxidoreductase, iron-sulfur protein,
putative - Chlorobium tepidum
Length = 345
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 17 LQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQA 196
+ R E GK+ L+ + E + D +C+LCA C + C + + Y+ P VL+++
Sbjct: 136 VSRMPEEQWGKKEFLISEEEFQT-YDKATDCILCASCVSECTILRAHKE-YVSPVVLLRS 193
Query: 197 YRWIIDSRDEATEKRLSKL 253
YR DSRD ++RL+ L
Sbjct: 194 YRMNADSRDGIHDQRLADL 212
>UniRef50_Q2JIV5 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=14; Cyanobacteria|Rep:
Succinate dehydrogenase/fumarate reductase, iron-sulfur
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 343
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +2
Query: 50 ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
E + LQ +R L+ C+LC C + C + N + ++GP L +A R + DSRD
Sbjct: 131 EREFLQLPAEREHLNAAGGCILCGACYSDCNAKEVNPE-FVGPHALARANRLVQDSRDSQ 189
Query: 230 TEKRLSKL 253
E+RL L
Sbjct: 190 REQRLQAL 197
>UniRef50_Q0RXW4 Cluster: Succinate dehydrogenase Fe-S protein
subunit; n=1; Rhodococcus sp. RHA1|Rep: Succinate
dehydrogenase Fe-S protein subunit - Rhodococcus sp.
(strain RHA1)
Length = 234
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 68 DVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRL 244
D E+R +D +C+ C C +SC G +LGPA L +A I DSRD ++RL
Sbjct: 134 DSEERKAIDPALDCIQCGACYSSC-GVAGLGKTFLGPAALNRAMVLITDSRDALGQERL 191
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIKT 354
V RCH + CT CPKGL+P RAI +++T
Sbjct: 200 VDRCHLMYGCTNVCPKGLDPARAIRRLRT 228
>UniRef50_Q28K79 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=2;
Rhodobacteraceae|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Jannaschia sp.
(strain CCS1)
Length = 237
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 65 QDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDE 226
+D RV+ + EC+ C+ C +C + N D YLGPA L +A+ + D++DE
Sbjct: 131 EDSAGRVEANAGIECINCSVCYAACDTVAGNTD-YLGPAALQRAWTLLNDAKDE 183
>UniRef50_A6DAI5 Cluster: Fumarate reductase, iron-sulfur subunit;
n=1; Caminibacter mediatlanticus TB-2|Rep: Fumarate
reductase, iron-sulfur subunit - Caminibacter
mediatlanticus TB-2
Length = 236
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 62 LQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKR 241
LQ E+ K D +C+LC C C + ++ D + GP V + +R++ DSRD++ ++
Sbjct: 123 LQTPEELKKYDKQTDCILCMACHFECEALDYDKD-FAGPFVFTKYFRFVFDSRDKSDKQE 181
Query: 242 LSKL 253
+L
Sbjct: 182 RIEL 185
>UniRef50_Q39YX0 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=1; Geobacter metallireducens
GS-15|Rep: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein - Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210)
Length = 344
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 44 GKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRD 223
G++ L+ D E ++ +C+LC C + C N Y+ P VL++A+R DSRD
Sbjct: 135 GRKEHLVSDGEFEA-INAASDCILCGSCYSECSMMEVNRS-YISPPVLVKAFRMNNDSRD 192
Query: 224 EATEKRLSKL 253
+RL ++
Sbjct: 193 TLACERLERV 202
>UniRef50_A1RZ94 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Thermofilum pendens
Hrk 5|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Thermofilum pendens
(strain Hrk 5)
Length = 219
Score = 40.7 bits (91), Expect = 0.037
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 50 ETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
E L+ V+ V+L+ L++CV C C ++CP +YLGP+V+ AYR S+D
Sbjct: 115 EPGTLERVDGVVELEKLFDCVECGVCYSACP-IANTFPEYLGPSVIALAYR---SSKDGK 170
Query: 230 TEKRLSKLRTHTLCTVAIQ 286
L R C A +
Sbjct: 171 VPAVLDSRRGVWACHAAFE 189
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 268 VYRCHTIMNCTRTCPKGLNPGRAIAQIKT-LLSG 366
V+ CH C+ CP G PG I +++ LSG
Sbjct: 181 VWACHAAFECSVRCPVGFKPGETIMKVRRGFLSG 214
>UniRef50_Q6LYC4 Cluster: Uncharacterized iron-sulfur protein
MMP1067; n=5; Methanococcus|Rep: Uncharacterized
iron-sulfur protein MMP1067 - Methanococcus maripaludis
Length = 494
Score = 40.7 bits (91), Expect = 0.037
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVK-LDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
++ ++Q++NE + KE L+ D +K + + C+ C C CP+ ++ Y GP
Sbjct: 101 TLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRGCIDCLSCIAMCPARKYSN--YPGP 158
Query: 179 AVLMQAYRWIIDSRDEATEKR 241
++ Q R+ D +DE ++
Sbjct: 159 TLMRQLARFAFDPKDEIDREK 179
>UniRef50_Q3ACD2 Cluster: Fumarate reductase, iron-sulfur subunit;
n=2; cellular organisms|Rep: Fumarate reductase,
iron-sulfur subunit - Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008)
Length = 263
Score = 40.3 bits (90), Expect = 0.049
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 2 SIEPWLQRENEAV----KGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKY 169
+++P++ ENE G+ +Q ++E+ ++ Y C+ C C +CP+ D +
Sbjct: 113 NVKPYVIPENEQEFINPTGEYSQTPAELEEYLQF--AY-CIKCGACLAACPTVGTTPD-F 168
Query: 170 LGPAVLMQAYRWIIDSRDEATEKR 241
GP L QAYR+ D+RD ++R
Sbjct: 169 PGPQALAQAYRYNADNRDFGEKER 192
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIK 351
E ++ + ++RCH C CPKG++P AI K
Sbjct: 191 ERKVQVDNPKGLWRCHMAGACAEACPKGVDPALAIQLFK 229
>UniRef50_O66828 Cluster: Fumarate reductase iron-sulfur subunit;
n=1; Aquifex aeolicus|Rep: Fumarate reductase
iron-sulfur subunit - Aquifex aeolicus
Length = 230
Score = 40.3 bits (90), Expect = 0.049
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 86 KLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSK 250
K++ +C+LC+ C + CP ++Y GP + YR++ D R+E E R+ +
Sbjct: 138 KIEKGADCILCSACQSYCPQVL--EEEYAGPLFFAKIYRFLEDPREEDKEFRIKE 190
>UniRef50_UPI00015BB01D Cluster: succinate dehydrogenase subunit B;
n=1; Ignicoccus hospitalis KIN4/I|Rep: succinate
dehydrogenase subunit B - Ignicoccus hospitalis KIN4/I
Length = 319
Score = 39.9 bits (89), Expect = 0.064
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 2 SIEPWLQRENEAVKG-KETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
S++P+L + E +K K +L V+ + L +CV C C + CP N +++ GP
Sbjct: 116 SVKPYLVPKEEVLKSDKWYPMLPAVQ--MDLWSSAQCVWCGVCYSVCPVAKVN-EEFAGP 172
Query: 179 AVLMQAYRWIIDSRDEATEKRL 244
L++ YR+ D RD +R+
Sbjct: 173 HALVKVYRFAYDPRDALGRERV 194
>UniRef50_A6FPW4 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Roseobacter sp.
AzwK-3b|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Roseobacter sp. AzwK-3b
Length = 244
Score = 39.5 bits (88), Expect = 0.085
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 77 DRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRD 223
+R D EC+ C C +C + N D YLGPA L +A+ + D++D
Sbjct: 140 ERQAADAGIECINCGICYAACDTVAGNAD-YLGPAALQRAWTLLNDAKD 187
Score = 35.1 bits (77), Expect = 1.8
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 271 YRCHTIMNCTRTCPKGLNPGRAIAQIK 351
+ CH++ +CTR CP L+P AIA +K
Sbjct: 204 HNCHSMGSCTRYCPNALDPMSAIAGLK 230
>UniRef50_P17596 Cluster: Fumarate reductase iron-sulfur subunit;
n=16; Bacteria|Rep: Fumarate reductase iron-sulfur
subunit - Wolinella succinogenes
Length = 239
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 5 IEPWL--QRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGP 178
+E W+ Q+E++ K +E + ++ +LD C+ C CC +C + D ++G
Sbjct: 118 VESWIHAQKEHDISKLEERIEPEVAQEVFELD---RCIECGCCIAACGTKIMRED-FVGA 173
Query: 179 AVLMQAYRWIIDSRDEATEK 238
A L + R++ID DE T++
Sbjct: 174 AGLNRVVRFMIDPHDERTDE 193
>UniRef50_Q7M826 Cluster: SUCCINATE DEHYDROGENASE IRON-SULFUR
PROTEIN; n=11; Campylobacterales|Rep: SUCCINATE
DEHYDROGENASE IRON-SULFUR PROTEIN - Wolinella
succinogenes
Length = 319
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+P L ++E + Q Q+ DR+ ++C+LC C + C + + Y+ P V
Sbjct: 116 IKPGLVAKSEFSAKEGCQQNQEEFDRIIKQ--WDCILCGSCVSECNKFSADQSDYMEPFV 173
Query: 185 LMQAYRWIIDSRDE 226
QA+R DSR +
Sbjct: 174 FTQAWRLANDSRSK 187
>UniRef50_A7BWP3 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=1; Beggiatoa sp. PS|Rep:
Succinate dehydrogenase/fumarate reductase iron-sulfur
protein - Beggiatoa sp. PS
Length = 341
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 5 IEPWLQRENEAVK---GKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLG 175
+ P+L E + +E+++ Q E+ + +C+LC C ++C + + Y G
Sbjct: 129 MHPYLMENRERIPESLAEESRMSQ--EELALFNYATDCILCGACFSACSTVKAD-PSYAG 185
Query: 176 PAVLMQAYRWIIDSRDEATEKRL 244
P + +AYR+ +D RD R+
Sbjct: 186 PVTIAKAYRFSVDVRDSFRGMRI 208
>UniRef50_A3CS04 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=3;
Methanomicrobiales|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 487
Score = 38.3 bits (85), Expect = 0.20
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 98 LYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRD------EATEKRLSKLRT 259
L +C+ C CC ++CP+ + GP VL Q R +D RD +A EK L T
Sbjct: 130 LRDCIECLCCVSACPAL--QVTDFAGPTVLRQEMRLALDPRDSGDRITDAIEKGLFYCTT 187
Query: 260 HTLCT 274
CT
Sbjct: 188 CKRCT 192
>UniRef50_Q9PJE9 Cluster: Succinate dehydrogenase, iron-sulfur
protein; n=10; Chlamydiales|Rep: Succinate
dehydrogenase, iron-sulfur protein - Chlamydia muridarum
Length = 265
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
I+ W+ + + +G Q+ Q E++ + L C+ C CC+ +CP D ++GPA
Sbjct: 122 IQGWISAD-KCGEGPGPQVSQ--EEQALMYSLSMCMTCGCCTEACPQVNEKSD-FMGPAA 177
Query: 185 LMQAYRWIIDSRDEATEKRLSKL 253
+ QA + ++ E RL L
Sbjct: 178 IAQARYFNSYPGEKRRESRLRAL 200
>UniRef50_Q8ZXH5 Cluster: Glycolate oxidase subunit glcF; n=3;
Pyrobaculum|Rep: Glycolate oxidase subunit glcF -
Pyrobaculum aerophilum
Length = 386
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 92 DGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSKLRTHTLC 271
D LY CV C C +CP+Y G + P + R +++ R A K L L + C
Sbjct: 5 DELYRCVHCGFCLPTCPTYLATGLEGNSPRGRLHLMRAVVEGRARAEGKLLEYLDSCVYC 64
>UniRef50_Q0BRV1 Cluster: Hypothetical membrane associated protein;
n=1; Granulibacter bethesdensis CGDNIH1|Rep:
Hypothetical membrane associated protein - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 457
Score = 37.1 bits (82), Expect = 0.45
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = -2
Query: 306 CASAVHDCMATVHRVCVLSFDKRFSV-ASSRESMIHL*ACMRTAGPRYLSPFHQYDGQLV 130
CASAV DC H + + F S S I + AGP L P + DG +
Sbjct: 6 CASAVSDCSGHCHMIAQNELNTAFGTKRESAASYITADGKLVIAGPNVLRPSYADDGSYL 65
Query: 129 E--QQAHSTHS*RPSNLTRSSTSWS 61
+ ST+ S LT S SWS
Sbjct: 66 GALTEGASTNFLPDSMLTNSQKSWS 90
>UniRef50_O06914 Cluster: Fumarate reductase iron-sulfur subunit;
n=37; Proteobacteria|Rep: Fumarate reductase iron-sulfur
subunit - Helicobacter pylori (Campylobacter pylori)
Length = 245
Score = 36.7 bits (81), Expect = 0.60
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
+E W + E + + ++ E + + L C+ C CC SC + ++G A
Sbjct: 121 VESWAHSKEEVDITRPEKRVEPDEAQEVFE-LDRCIECGCCIASCGTKLMR-PNFIGAAG 178
Query: 185 LMQAYRWIIDSRDEATE 235
+ +A R++IDS DE +
Sbjct: 179 MNRAMRFMIDSHDERND 195
>UniRef50_Q94GJ7 Cluster: Putative polyprotein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 1120
Score = 36.3 bits (80), Expect = 0.79
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 244 IKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIM 393
+K +D+ Y C + + R CP N G + K +SG +KK PPIM
Sbjct: 419 LKMEDS-PCYVCVKVGHFARLCPNRQNTGGQTSYQKPSISGFIKKNPPIM 467
>UniRef50_A1WKV3 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=6; Proteobacteria|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Verminephrobacter eiseniae (strain
EF01-2)
Length = 251
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 92 DGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSR 220
D EC+ C C +C W+ +YLGPA L +A+ D R
Sbjct: 155 DAAIECINCGVCHAACDVVAWDR-QYLGPAALNRAWSLFNDER 196
>UniRef50_Q1QFA8 Cluster: Putative uncharacterized protein; n=1;
Nitrobacter hamburgensis X14|Rep: Putative
uncharacterized protein - Nitrobacter hamburgensis
(strain X14 / DSM 10229)
Length = 306
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 55 SIAPGCRGPRQVGWSL*MCAMCLLFDELPVVLVEWR*VPRPCCPHAGLQV 204
+++ G RQ W L +C CL DE P + WR R C H G Q+
Sbjct: 111 NVSSSAVGRRQATW-LQLCPRCLEEDEAPYLRSHWRLATRLICQHHGRQL 159
>UniRef50_Q5CPG0 Cluster: Zfwd1 protein, CCCH like RNA binding
domain fused to WD repeats; n=2; Cryptosporidium|Rep:
Zfwd1 protein, CCCH like RNA binding domain fused to WD
repeats - Cryptosporidium parvum Iowa II
Length = 402
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 108 VCYVLAVRRVARRTGGMEIST*ALLSSCRPTGGSLTPEMKPLRNVYQNSGHILCVPLP-Y 284
+C + V RV TG E +L S G++T + K + + QN+GH+ C+ LP +
Sbjct: 296 LCSLQGVIRVISPTGE-ETFRKSLGSPALCMDGTVTADAKHILMMGQNNGHLRCITLPLF 354
Query: 285 NHELHSHMPE-RSEPR 329
+ L H P+ RSE R
Sbjct: 355 DSVLEFHTPDTRSEIR 370
>UniRef50_A7BA75 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 826
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 62 LQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYR 202
+ D + +LD LY C C C CP+ WN K L P +L+ R
Sbjct: 333 IDDFSWKARLD-LYSCTECGRCQELCPA--WNTQKPLSPKLLIMGLR 376
>UniRef50_A4J5E9 Cluster: Putative uncharacterized protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 678
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAV 184
IEP + E+E+++ L+D + +D Y C C C +CP+Y K+L P
Sbjct: 250 IEP-INFEDESIEQYGVAKLEDFNWKQIMDA-YACAECGRCQANCPAYL--SGKHLSPKH 305
Query: 185 LMQAYRWIIDSR 220
L+ R +D +
Sbjct: 306 LIHKLRLHVDEK 317
>UniRef50_O53142 Cluster: Thiol:fumarate reductase subunit B
protein; n=4; Methanobacteriaceae|Rep: Thiol:fumarate
reductase subunit B protein - Methanobacterium
thermoformicicum
Length = 488
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 65 QDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEA 229
+D +D KL G C+ C C +SCP +Y GP + ++ D RDEA
Sbjct: 125 EDYQDTKKLRG---CIECFSCISSCPVIK-ESTEYAGPYFMRYISKFAFDPRDEA 175
>UniRef50_O66892 Cluster: Fumarate reductase iron-sulfur subunit;
n=2; Aquifex aeolicus|Rep: Fumarate reductase
iron-sulfur subunit - Aquifex aeolicus
Length = 230
Score = 34.3 bits (75), Expect = 3.2
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 101 YECVLCACCSTSCPSYWWNGDKYLG-PAVLMQAYRWIIDSRDEATEKRLSKLRTHTLCTV 277
++C+LC C+ CP+ DK G P+ +AY + D R+ +K L KL+ L +
Sbjct: 128 WDCILCGICNYVCPAI--QADKNFGLPSTFTKAYGVVFDKRN---KKGLDKLK--DLVPL 180
Query: 278 AIQS*T 295
IQS T
Sbjct: 181 NIQSCT 186
>UniRef50_A7I4E8 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Succinate dehydrogenase
and fumarate reductase iron-sulfur protein -
Methanoregula boonei (strain 6A8)
Length = 489
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 98 LYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEAT 232
L +C+ C C + CP+ ++LGP + Q R +D RD T
Sbjct: 132 LRDCIECLACVSVCPA--MTVTEFLGPTAMRQEMRLALDPRDTGT 174
>UniRef50_A2BMI3 Cluster: Fe-S oxidoreductase; n=1; Hyperthermus
butylicus DSM 5456|Rep: Fe-S oxidoreductase -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 486
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 265 SVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIMD 396
+VYRC +C TCP G++ G I ++ +++ + + P ++D
Sbjct: 116 AVYRCTNCGHCYLTCPFGIDSGSVIQELLKIVATDMGRVPSLID 159
>UniRef50_P52074 Cluster: Glycolate oxidase iron-sulfur subunit;
n=108; Proteobacteria|Rep: Glycolate oxidase iron-sulfur
subunit - Escherichia coli (strain K12)
Length = 407
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +2
Query: 50 ETQLLQDVEDRVK-LDG---LYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDS 217
+TQL +++ + L+ L CV C C+ +CP+Y GD+ GP + + +++
Sbjct: 2 QTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG 61
Query: 218 RDEA--TEKRLSKLRTHTLCTVAIQS 289
+ T++ L + T C S
Sbjct: 62 NEVTLKTQEHLDRCLTCRNCETTCPS 87
>UniRef50_Q5P537 Cluster: Electron transport complex protein rnfC;
n=10; Proteobacteria|Rep: Electron transport complex
protein rnfC - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 508
Score = 33.5 bits (73), Expect = 5.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 68 DVEDRVKLDGLYECVLCACCSTSCPSY 148
D++ VK GL +C+ C CC+ CPS+
Sbjct: 405 DLDAAVKF-GLKDCIACGCCAYDCPSH 430
>UniRef50_A6CBN0 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 453
Score = 33.5 bits (73), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 104 ECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATE 235
+C+ C C+ +CP+Y G++ P + R ++D R E ++
Sbjct: 32 DCIHCGLCTAACPTYLETGNENDSPRGRIYLMRAVVDQRVELSD 75
>UniRef50_A0CDA0 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 508
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 570 SNDVDFNLYYHYKIFPLVISLHKHQKIRNNVVVQTSSVE 686
SN +DFN Y++ K PLVI + Q+ N +Q +S+E
Sbjct: 427 SNTLDFNTYFNCKQSPLVIWICDLQQTCNQYFIQQNSIE 465
>UniRef50_Q0AZ32 Cluster: Putative iron-sulfur-binding reductase;
n=1; Syntrophomonas wolfei subsp. wolfei str.
Goettingen|Rep: Putative iron-sulfur-binding reductase -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 714
Score = 33.1 bits (72), Expect = 7.4
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 5 IEPWLQRENEAVKGKETQLLQDVEDRVKLD--GLYECVLCACCSTSCPSYWWNGDKYLGP 178
+EP R ++ ET ++++ED D L C+ C C +CP+Y N K+L P
Sbjct: 266 LEPSANRMVYNIEEAETFGVENIEDFGWKDLLDLDSCIRCGRCQENCPAY--NTGKHLNP 323
Query: 179 AV-LMQAYRWIIDSR 220
+ L+Q + +D++
Sbjct: 324 KITLIQNMKAHLDAK 338
>UniRef50_A6DLY9 Cluster: Glycolate oxidase iron-sulfur subunit;
n=1; Lentisphaera araneosa HTCC2155|Rep: Glycolate
oxidase iron-sulfur subunit - Lentisphaera araneosa
HTCC2155
Length = 397
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 92 DGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEK 238
D L C+ C C SCP+Y G++ P + +R + R + EK
Sbjct: 16 DKLLNCIHCGLCLDSCPTYKLTGNENNSPRGRLAMWRAEDEGRTQQAEK 64
>UniRef50_Q4JBT7 Cluster: 4Fe-4S binding domain protein; n=4;
Sulfolobaceae|Rep: 4Fe-4S binding domain protein -
Sulfolobus acidocaldarius
Length = 230
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKT--LLSGIVKKQP 384
+ I+ QD S++RC + CT CPKG+ + I L +VKK P
Sbjct: 97 QALIQLQD--SLWRCVSCQKCTHRCPKGVMVEEVVHSIHNYFLKHNLVKKDP 146
>UniRef50_Q52716 Cluster: Electron transport complex protein rnfC;
n=4; Rhodobacter|Rep: Electron transport complex protein
rnfC - Rhodobacter capsulatus (Rhodopseudomonas
capsulata)
Length = 519
Score = 33.1 bits (72), Expect = 7.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 68 DVEDRVKLDGLYECVLCACCSTSCPS 145
D+E K+ GL +C+ C CCS +CP+
Sbjct: 408 DLEGAAKV-GLMDCLACGCCSYNCPA 432
>UniRef50_UPI0000498AA2 Cluster: long-chain-fatty-acid--CoA ligase;
n=2; Entamoeba histolytica HM-1:IMSS|Rep:
long-chain-fatty-acid--CoA ligase - Entamoeba
histolytica HM-1:IMSS
Length = 774
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +3
Query: 501 MLRVNFLNVKYDINENCTKANECSNDVDFNLYYHYKIFPLVISLHKHQKIRNNVVVQTSS 680
+ +N+ K ++ E C +D F + K+ +L + +I+ VVV
Sbjct: 636 LFEINYDKAKEELKEKCPSKENIRSDAFFGTFLRQKVEAFNQTLPRSYRIKKFVVVDLPD 695
Query: 681 VEC 689
VEC
Sbjct: 696 VEC 698
>UniRef50_Q72JM0 Cluster: Iron-sulfur binding reductase, putative;
n=2; Thermus thermophilus|Rep: Iron-sulfur binding
reductase, putative - Thermus thermophilus (strain HB27
/ ATCC BAA-163 / DSM 7039)
Length = 661
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 62 LQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 205
L+D+ + LD Y C++C C +CP+Y K L PA ++ + R+
Sbjct: 270 LEDLSWKRLLDA-YACIMCNRCQEACPAY--TTGKALSPAAILISERY 314
>UniRef50_Q21I18 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Saccharophagus degradans 2-40|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
17024)
Length = 745
Score = 32.7 bits (71), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 77 DRVKLDGLYECVLCACCSTSCPS 145
DR+K L++C+ C CS CPS
Sbjct: 399 DRLKAHNLFDCIECGACSYVCPS 421
>UniRef50_Q0YKK5 Cluster: Putative uncharacterized protein; n=2;
Geobacter|Rep: Putative uncharacterized protein -
Geobacter sp. FRC-32
Length = 661
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPIMDPA 402
E+ ++T T +++ C T C CP +N AI +++ L + P IM A
Sbjct: 330 ESLLETITTDAIFNCTTCAACMEACPVAVNQPNAILRMRQHLLMERSEMPEIMGQA 385
>UniRef50_A5N696 Cluster: Predicted succinate dehydrogenase
iron-sulfur protein; n=2; Clostridiales|Rep: Predicted
succinate dehydrogenase iron-sulfur protein -
Clostridium kluyveri DSM 555
Length = 233
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 107 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIID 214
CV+C CC CPS+ G+ G AV M A +ID
Sbjct: 146 CVMCGCCLEVCPSFSVKGN--FGGAVSMSAAFKLID 179
>UniRef50_A3QGY2 Cluster: 3-hydroxyacyl-CoA dehydrogenase,
NAD-binding; n=3; Proteobacteria|Rep: 3-hydroxyacyl-CoA
dehydrogenase, NAD-binding - Shewanella loihica (strain
BAA-1088 / PV-4)
Length = 708
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 144 RTGGMEIST*ALLSSCRPTGGSLTPEMKPLRNVYQNSGHILCVPLPYNHEL-HSHMPERS 320
R GG++++ +++S RP G + + + N+YQ+ G+ + + + EL H P+RS
Sbjct: 144 RIGGVQLAL-EMITSGRPLGAAAMLDAGVIDNLYQDGGNFIQAAVDFAQELVAQHKPKRS 202
>UniRef50_A2BMS4 Cluster: Predicted Fe-S oxidoreductase; n=2;
Desulfurococcales|Rep: Predicted Fe-S oxidoreductase -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 100
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 107 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATEKRLSKLRTHTLC 271
C C C +CP+ + GP + R + + + E T + ++ L T TLC
Sbjct: 14 CAYCGFCEQACPTLPLGSHRGYGPRGRVLLARLLAEDKIEPTRELVASLYTCTLC 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,980,648
Number of Sequences: 1657284
Number of extensions: 15199561
Number of successful extensions: 39151
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 36904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39105
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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