Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00809
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 2   SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSC 139
           +I+P    + E            V + VKL  LY     AC S  C
Sbjct: 310 NIDPENHNKTEIFLNITGDKTNSVFEHVKLGSLYHISFMACSSAGC 355


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 682 TELVCTTTLFLIF 644
           T  VC TT+FLIF
Sbjct: 153 TYYVCNTTIFLIF 165


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 88  LDAVLYILEQLSLLTFNSFIFPLQ 17
           L+++LY++ +L ++TF  FI  +Q
Sbjct: 277 LESLLYMVTKLVVVTFLKFIKKIQ 300


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 180 LSSCRPTGGSLTPEMKPLRNVYQNSGHILCVPLPYNHELHSHMPERSE 323
           LS  RP+GG    +M+  R +Y +S  +  +   +    +  +PER+E
Sbjct: 107 LSLERPSGGGKGKKMRKPRTIY-SSLQLQQLNRRFQRTQYLALPERAE 153


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 574 MMLTSTYIIIIKYFHWLSLYINI 642
           +ML   ++   +  +W S Y NI
Sbjct: 929 LMLVGAFVAAFQIDNWTSFYYNI 951


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 574 MMLTSTYIIIIKYFHWLSLYINI 642
           +ML   ++   +  +W S Y NI
Sbjct: 929 LMLVGAFVAAFQIDNWTSFYYNI 951


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 574 MMLTSTYIIIIKYFHWLSLYINI 642
           +ML   ++   +  +W S Y NI
Sbjct: 929 LMLVGAFVAAFQIDNWTSFYYNI 951


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 574 MMLTSTYIIIIKYFHWLSLYINI 642
           +ML   ++   +  +W S Y NI
Sbjct: 929 LMLVGAFVAAFQIDNWTSFYYNI 951


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,572
Number of Sequences: 336
Number of extensions: 4035
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)