Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00809
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U17886-1|AAA80581.1| 281|Homo sapiens succinate dehydrogenase i... 150 6e-36
U17248-1|AAA81167.1| 280|Homo sapiens succinate dehydrogenase i... 150 6e-36
M32246-1|AAA35708.1| 262|Homo sapiens protein ( Human succinate... 150 6e-36
D10245-1|BAA01089.1| 262|Homo sapiens succinate-ubiquinone oxid... 150 6e-36
DQ403007-1|ABD77140.1| 255|Homo sapiens succinate dehydrogenase... 150 6e-36
BC007840-1|AAH07840.1| 280|Homo sapiens succinate dehydrogenase... 150 6e-36
AL049569-5|CAB96822.1| 280|Homo sapiens succinate dehydrogenase... 150 6e-36
BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein. 31 5.7
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 31 5.7
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 31 5.7
>U17886-1|AAA80581.1| 281|Homo sapiens succinate dehydrogenase
iron-protein subunit B protein.
Length = 281
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 153 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 211
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 212 VLMQAYRWMIDSRDDFTEERLAKLQ 236
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 230 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 281
>U17248-1|AAA81167.1| 280|Homo sapiens succinate dehydrogenase
iron-protein subunit protein.
Length = 280
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 152 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQ 235
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 229 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 280
>M32246-1|AAA35708.1| 262|Homo sapiens protein ( Human
succinate-ubiquinone oxidoreductase iron sulfur (Ip)
subunit mRNA, 3' end. ).
Length = 262
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 134 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 192
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 193 VLMQAYRWMIDSRDDFTEERLAKLQ 217
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 211 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 262
>D10245-1|BAA01089.1| 262|Homo sapiens succinate-ubiquinone
oxidoreductase iron sulfur subunit protein.
Length = 262
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 134 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 192
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 193 VLMQAYRWMIDSRDDFTEERLAKLQ 217
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 211 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 262
>DQ403007-1|ABD77140.1| 255|Homo sapiens succinate dehydrogenase
complex subunit B protein.
Length = 255
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 143 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 201
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 202 VLMQAYRWMIDSRDDFTEERLAKLQ 226
Score = 69.3 bits (162), Expect = 1e-11
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIA 342
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA
Sbjct: 220 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIA 255
>BC007840-1|AAH07840.1| 280|Homo sapiens succinate dehydrogenase
complex, subunit B, iron sulfur (Ip) protein.
Length = 280
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 152 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQ 235
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 229 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 280
>AL049569-5|CAB96822.1| 280|Homo sapiens succinate dehydrogenase
complex, subunit B, iron sulfur (Ip) protein.
Length = 280
Score = 150 bits (363), Expect = 6e-36
Identities = 63/85 (74%), Positives = 79/85 (92%)
Frame = +2
Query: 2 SIEPWLQRENEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTSCPSYWWNGDKYLGPA 181
SIEP+L++++E+ +GK+ Q LQ +E+R KLDGLYEC+LCACCSTSCPSYWWNGDKYLGPA
Sbjct: 152 SIEPYLKKKDESQEGKQ-QYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 210
Query: 182 VLMQAYRWIIDSRDEATEKRLSKLR 256
VLMQAYRW+IDSRD+ TE+RL+KL+
Sbjct: 211 VLMQAYRWMIDSRDDFTEERLAKLQ 235
Score = 76.6 bits (180), Expect = 9e-14
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 235 ETFIKTQDTYSVYRCHTIMNCTRTCPKGLNPGRAIAQIKTLLSGIVKKQPPI 390
E K QD +S+YRCHTIMNCTRTCPKGLNPG+AIA+IK +++ +K+ +
Sbjct: 229 ERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV 280
>BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein.
Length = 743
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 195 PTGGSLTPEMKPLRNVYQNSGHILCVPLPYNHELHSHMPERSEPRPGHCPDQN 353
PT + T E + +N+ GH CVP P ++ H + RS P+ +C D N
Sbjct: 56 PTQVTETDECRLNQNI---CGHGECVPGPPDYSCHCNPGYRSHPQHRYCVDVN 105
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 195 PTGGSLTPEMKPLRNVYQNSGHILCVPLPYNHELHSHMPERSEPRPGHCPDQN 353
PT + T E + +N+ GH CVP P ++ H + RS P+ +C D N
Sbjct: 648 PTQVTETDECRLNQNI---CGHGECVPGPPDYSCHCNPGYRSHPQHRYCVDVN 697
>AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming growth
factor beta binding protein 3 protein.
Length = 1256
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 195 PTGGSLTPEMKPLRNVYQNSGHILCVPLPYNHELHSHMPERSEPRPGHCPDQN 353
PT + T E + +N+ GH CVP P ++ H + RS P+ +C D N
Sbjct: 569 PTQVTETDECRLNQNI---CGHGECVPGPPDYSCHCNPGYRSHPQHRYCVDVN 618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,304,160
Number of Sequences: 237096
Number of extensions: 2489659
Number of successful extensions: 16344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16332
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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