Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00808
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    28   0.28 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.1  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 562 LAKSMTCM*SRIPVPSGVCSRFRKR*AQVSCREQLARG 449
           L+   TC  +++   SG+ +R   R A V CR  LA G
Sbjct: 20  LSNPPTCTSAKMMASSGMSTRASARSASVDCRSSLASG 57


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 664 TYSKESQKPKCHSSTSIEDLET 729
           TYS++  KPK  SST  E  +T
Sbjct: 344 TYSQKDSKPKTSSSTERESFDT 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,085
Number of Sequences: 2352
Number of extensions: 18294
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)