Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00807
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 79 2e-13
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 70 5e-11
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 59 1e-07
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 58 2e-07
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 56 7e-07
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 52 2e-05
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 49 1e-04
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 46 0.001
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 44 0.005
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 43 0.009
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 42 0.017
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 41 0.029
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 41 0.038
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 39 0.15
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 38 0.27
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 38 0.36
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q6PDI4 Cluster: Sfrs8 protein; n=3; Murinae|Rep: Sfrs8 ... 34 4.4
UniRef50_A2DFN3 Cluster: Beige/BEACH domain containing protein; ... 34 4.4
UniRef50_A2F5X8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNS
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNS 37
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANS 37
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +3
Query: 39 RLAASVMRCGKKKVWLDPNEINEIANTNS 125
RLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANS 29
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSSK 131
MS+L+ QKRLA++V CGKKK+WLDPNE I N NS K
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRK 39
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSSK 131
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NS K
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRK 59
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 52.0 bits (119), Expect = 2e-05
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEI 101
M SLKLQKRLAAS++ CG +K+W+DPNE+
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEV 29
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+S
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDS 37
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 46.0 bits (104), Expect = 0.001
Identities = 13/34 (38%), Positives = 29/34 (85%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAN 116
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVAS 34
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 27 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
+L R + +RCGK+KVWLDP+E +EI N +S
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASS 71
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA 113
M+ LK Q+R+AA V+ GK ++W DP+E EIA
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIA 33
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 41.9 bits (94), Expect = 0.017
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 39 RLAASVMRCGKKKVWLDPNEINEIANTN 122
+ A +++CG+ KVW+DPNE+NEI+ N
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVN 46
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 41.1 bits (92), Expect = 0.029
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEI 110
MS+ + +RLA+ ++ CGKKK+WLD NEI +
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERL 32
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAN 116
MS L QKRLAA V+ G+ +VW DP+ +EIA+
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIAD 34
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
M++L+LQKRLAA V++CGK++V +P I +S
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASS 37
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 37.9 bits (84), Expect = 0.27
Identities = 10/29 (34%), Positives = 24/29 (82%)
Frame = +3
Query: 24 LKLQKRLAASVMRCGKKKVWLDPNEINEI 110
+ +Q+R+AA +++CG ++VW+DP +++ +
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRV 34
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 37.5 bits (83), Expect = 0.36
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 33 QKRLAASVMRCGKKKVWLDPNEINEIA 113
Q+R+AA +++ G +VW+DPN + E+A
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVA 32
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.9
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 33 QKRLAASVMRCGKKKVWLDPNEINEIAN 116
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q6PDI4 Cluster: Sfrs8 protein; n=3; Murinae|Rep: Sfrs8
protein - Mus musculus (Mouse)
Length = 503
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 222 CLFTHLQFM*VTILLSGIALVCHSHIDSHCTYWSWCLR-SH*FHLDPT 82
C + F I LS I L S D+ CT+ WCL+ H HL PT
Sbjct: 30 CAHSRCAFPADAICLSAIPLASGSACDTVCTFCCWCLKIRHNCHLFPT 77
>UniRef50_A2DFN3 Cluster: Beige/BEACH domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: Beige/BEACH domain
containing protein - Trichomonas vaginalis G3
Length = 2529
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 442 NILSYIGVNLVRNSTFCVGITKKIARQEF*GPGNGIFRRQSTDAQRQSKENTSKSFAKIS 263
N++S+ + + N T+C ITK + + ++T Q +S+ K+ A +
Sbjct: 726 NLISFNNASKLFNQTYCKAITKTTLNEALADLLISLCLNETTTFQTESRPRVIKNTAALW 785
Query: 262 TRINLTKKNLIC-TLFIYTLTIYVS 191
NLTK + + +F Y L I S
Sbjct: 786 LLYNLTKSSTLSDRIFAYLLAIISS 810
>UniRef50_A2F5X8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Trichomonas vaginalis G3
Length = 2779
Score = 33.5 bits (73), Expect = 5.8
Identities = 32/106 (30%), Positives = 48/106 (45%)
Frame = +2
Query: 200 NCKCVNKQSAN*IFFCQVNPGRNFGK*LTRIFFRLPLGISALSSKNSITRPLKLLPSYFF 379
NC C +K I FCQ N ++F K L + L I+AL KN I +PL LL F
Sbjct: 671 NCNCPSKNLCEFIEFCQ-NLQKDFLK-LRAVLSSL---INAL--KNDIKQPLALLKQCF- 722
Query: 380 CNTYTKSRISHQIYTNVT*YVMMLVPNFKSLIYNTCSKICQVVPKN 517
Y + +SH + +++ + N + I + +PKN
Sbjct: 723 -ERYESNFLSHPMIPQFYSTLLVYLDNSSAEIRQEIVNFIKNIPKN 767
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,459,248
Number of Sequences: 1657284
Number of extensions: 14819215
Number of successful extensions: 35335
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 34044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35321
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -