Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00807
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19 pro...    70   8e-12
S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19 pro...    70   8e-12
BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein pr...    70   8e-12
BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19 p...    70   8e-12
BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19 p...    70   8e-12
BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19 p...    70   8e-12
BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19 p...    70   8e-12
BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19 p...    70   8e-12
AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19 v...    70   8e-12
AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19 p...    39   0.017

>X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein
           protein.
          Length = 205

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 10  MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 46


>BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19
           variant protein.
          Length = 196

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 15  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 125
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NS
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37


>AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19
           protein.
          Length = 173

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +3

Query: 72  KKVWLDPNEINEIANTNS 125
           KKVWLDPNE NEIAN NS
Sbjct: 1   KKVWLDPNETNEIANANS 18


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,216,222
Number of Sequences: 237096
Number of extensions: 2285944
Number of successful extensions: 3400
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3400
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)