Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00805
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p pro... 33 0.28
AE014296-3580|AAF51749.2| 735|Drosophila melanogaster CG32438-P... 33 0.28
AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-P... 33 0.28
AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-P... 33 0.28
AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein... 32 0.66
AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep pro... 31 2.0
AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-P... 31 2.0
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 29 8.1
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 29 8.1
AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 29 8.1
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 29 8.1
>BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p
protein.
Length = 1034
Score = 33.5 bits (73), Expect = 0.28
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +3
Query: 228 KKYSRFQRTARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKLIAN 407
++YSR ++ +K D+++ + + +L+ K ID + K N +++ N L N
Sbjct: 381 EQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAM-NWLAQN 439
Query: 408 KKRALSHYNGPEITSAFGSVNPDSSFLE 491
K+R + P I + D+ FLE
Sbjct: 440 KQRYKLNVYDPMILELTVQNHEDAKFLE 467
>AE014296-3580|AAF51749.2| 735|Drosophila melanogaster CG32438-PA,
isoform A protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.28
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +3
Query: 228 KKYSRFQRTARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKLIAN 407
++YSR ++ +K D+++ + + +L+ K ID + K N +++ N L N
Sbjct: 348 EQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAM-NWLAQN 406
Query: 408 KKRALSHYNGPEITSAFGSVNPDSSFLE 491
K+R + P I + D+ FLE
Sbjct: 407 KQRYKLNVYDPMILELTVQNHEDAKFLE 434
>AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-PB,
isoform B protein.
Length = 992
Score = 33.5 bits (73), Expect = 0.28
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +3
Query: 228 KKYSRFQRTARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKLIAN 407
++YSR ++ +K D+++ + + +L+ K ID + K N +++ N L N
Sbjct: 348 EQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAM-NWLAQN 406
Query: 408 KKRALSHYNGPEITSAFGSVNPDSSFLE 491
K+R + P I + D+ FLE
Sbjct: 407 KQRYKLNVYDPMILELTVQNHEDAKFLE 434
>AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-PD,
isoform D protein.
Length = 1025
Score = 33.5 bits (73), Expect = 0.28
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +3
Query: 228 KKYSRFQRTARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKLIAN 407
++YSR ++ +K D+++ + + +L+ K ID + K N +++ N L N
Sbjct: 381 EQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAM-NWLAQN 439
Query: 408 KKRALSHYNGPEITSAFGSVNPDSSFLE 491
K+R + P I + D+ FLE
Sbjct: 440 KQRYKLNVYDPMILELTVQNHEDAKFLE 467
>AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein
protein.
Length = 1030
Score = 32.3 bits (70), Expect = 0.66
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 228 KKYSRFQRTARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIK---RNNKLISKDNKL 398
++YSR ++ +K D+++ + + +L+ K IDV + + +N L+ N L
Sbjct: 362 EQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDVSSYEIRAKNPNLVVAMNWL 421
Query: 399 IANKKRALSHYNGPEITSAFGSVNPDSSFLE 491
NK+R + P I + D+ FLE
Sbjct: 422 AQNKQRYKLNVYDPMILELTVQNHEDAKFLE 452
>AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep
protein.
Length = 939
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 512 DGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDSEN 622
DG+ N++V VHS+ ++GN T + +KV S+++N
Sbjct: 359 DGEPIRNAEVTVHSDKEDGNITTSILTLKVT-SENDN 394
>AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-PA
protein.
Length = 939
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 512 DGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDSEN 622
DG+ N++V VHS+ ++GN T + +KV S+++N
Sbjct: 359 DGEPIRNAEVTVHSDKEDGNITTSILTLKVT-SENDN 394
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 327 SKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHYNGPEITSAFGSV 467
S + N + L++K +NKL S D+ + +H N P T+ SV
Sbjct: 77 SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSV 123
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 327 SKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHYNGPEITSAFGSV 467
S + N + L++K +NKL S D+ + +H N P T+ SV
Sbjct: 77 SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSV 123
>AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB,
isoform B protein.
Length = 343
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 327 SKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHYNGPEITSAFGSV 467
S + N + L++K +NKL S D+ + +H N P T+ SV
Sbjct: 6 SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSV 52
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 327 SKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHYNGPEITSAFGSV 467
S + N + L++K +NKL S D+ + +H N P T+ SV
Sbjct: 77 SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSV 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,239,778
Number of Sequences: 53049
Number of extensions: 566539
Number of successful extensions: 1680
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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