Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00804
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 146 3e-34
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 142 4e-33
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 140 2e-32
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 133 3e-30
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 112 4e-24
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 112 5e-24
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 109 4e-23
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 3e-21
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 92 6e-18
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 81 1e-14
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 73 5e-12
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 64 1e-09
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 63 4e-09
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 3e-07
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 52 7e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 48 9e-05
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 42 0.006
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 39 0.057
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 38 0.099
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 0.17
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 38 0.17
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 37 0.30
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 36 0.70
UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2; ... 32 8.6
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 146 bits (354), Expect = 3e-34
Identities = 65/75 (86%), Positives = 71/75 (94%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNKQYFKR+QVKFK RREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 211 TCQVAYSRIXGDHIV 255
TCQ+AYSRI GD I+
Sbjct: 61 TCQIAYSRIEGDKIL 75
Score = 60.9 bits (141), Expect(2) = 3e-13
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +3
Query: 414 EYNVEPVDNGPGAFRCYLDVGLARTTTGARV 506
EYNVE V+NGPGAFRCYLDVGL RTTTGA V
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACV 128
Score = 35.9 bits (79), Expect(2) = 3e-13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 255 CAAYSHELPRYGVK 296
CAAYSHELPRYGVK
Sbjct: 76 CAAYSHELPRYGVK 89
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 142 bits (344), Expect = 4e-33
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 211 TCQVAYSRIXGDHIV 255
T Q+AY+RI GD +V
Sbjct: 61 TVQIAYARIEGDRVV 75
Score = 108 bits (260), Expect = 6e-23
Identities = 51/84 (60%), Positives = 57/84 (67%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV
Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135
Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
D+GPGAFRC+LDVGLARTTTGARV
Sbjct: 136 DDGPGAFRCFLDVGLARTTTGARV 159
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 140 bits (338), Expect = 2e-32
Identities = 61/75 (81%), Positives = 70/75 (93%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 211 TCQVAYSRIXGDHIV 255
CQ+AY+RI GD IV
Sbjct: 61 ICQIAYARIEGDMIV 75
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/84 (55%), Positives = 51/84 (60%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
D PGAF CYLD GLARTTTG +V
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKV 159
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 133 bits (321), Expect = 3e-30
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MG VKV+KNK YFKRYQVK + RREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 211 TCQVAYSRIXGDHIVA 258
Q+AYS+I GD +VA
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 75.4 bits (177), Expect = 7e-13
Identities = 38/83 (45%), Positives = 48/83 (57%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
+AYSHELPRYG+KVGLTNYAAAY+TG +YNVE +
Sbjct: 77 SAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-E 135
Query: 438 NGPGAFRCYLDVGLARTTTGARV 506
F+ LD+GLARTTTG+++
Sbjct: 136 GDRAPFKAVLDIGLARTTTGSKI 158
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 112 bits (270), Expect = 4e-24
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M FVK+VK YFKR+Q KF+ RREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 211 TCQVAYSRIXGDHIVA 258
CQV Y+ + GD +VA
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 40.7 bits (91), Expect = 0.019
Identities = 30/83 (36%), Positives = 38/83 (45%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
AA S EL R+G+ GLTNYAAAY+TG + N++
Sbjct: 77 AAESTELKRFGLTSGLTNYAAAYATG---LLLARRTLKTLKMDKFYEGNKTIDGNLKTQR 133
Query: 438 NGPGAFRCYLDVGLARTTTGARV 506
P F LD+GL R+T G RV
Sbjct: 134 ERP--FFAVLDIGLVRSTLGNRV 154
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 112 bits (269), Expect = 5e-24
Identities = 46/75 (61%), Positives = 64/75 (85%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M FVKVVKNK YFKR+QVK++ RREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 211 TCQVAYSRIXGDHIV 255
Q+ ++I GD +V
Sbjct: 84 IAQIVQAKIVGDEVV 98
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 100 AAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKK 159
Query: 438 NGPG------AFRCYLDVGLARTTTGARV 506
+ G F+ LDVGLARTTTGARV
Sbjct: 160 DDEGDDEERFPFKAILDVGLARTTTGARV 188
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 109 bits (262), Expect = 4e-23
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M +VKVVKNK YFKRYQVK++ RREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 211 TCQVAYSRIXGDHIVA 258
CQ+A S I GD I++
Sbjct: 61 ICQIASSHIEGDKILS 76
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 261 AYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 431
A S EL RYG+ VGL NYAAAY+TG E +
Sbjct: 78 AKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKE 137
Query: 432 VDNGPGAFRCYLDVGLARTTTGARV 506
+ + +LDVG+ RTTTG RV
Sbjct: 138 EEGDRKPIKAFLDVGITRTTTGNRV 162
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (246), Expect = 3e-21
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
+ FVK K + Y KR+QVKFK RR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 211 TCQVAYSRIXGDHIVALLIHMSCHVMV*RLV*QIMLQHIQL 333
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 92.3 bits (219), Expect = 6e-18
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +1
Query: 46 VVKNKQYFKRYQVKFKXRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 219
V K Y RYQVKF RR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 220 VAYSRIXGD 246
V Y+ + GD
Sbjct: 73 VVYATLSGD 81
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 85 CAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQG 144
Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
D F+C+LD GL RT+TGARV
Sbjct: 145 DEEARPFKCFLDTGLVRTSTGARV 168
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 81.0 bits (191), Expect = 1e-14
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +1
Query: 43 KVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 222
K+VKN YF R+Q KF+ RRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 223 AYSRIXGDHIV 255
+ + GD V
Sbjct: 64 VVAELTGDKTV 74
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/84 (41%), Positives = 44/84 (52%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
C A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 75 CQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDEE 131
Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
+ P F+ LDVGLARTTTGA+V
Sbjct: 132 NRRP--FKVILDVGLARTTTGAKV 153
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 72.5 bits (170), Expect = 5e-12
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +1
Query: 82 VKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGDHIV 255
++ K +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ + D ++
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVL 364
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/84 (38%), Positives = 39/84 (46%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 365 CAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDED 424
Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
F+ LD GL RTTTG RV
Sbjct: 425 QKEKKPFKAILDAGLVRTTTGNRV 448
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYY 123
+GFVKV+K K YFKR+Q K++ RR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYR-RRRGKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 64.5 bits (150), Expect = 1e-09
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +1
Query: 58 KQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 237
+ Y K +QVK + RREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 238 XGDHIV 255
GD ++
Sbjct: 64 DGDRVM 69
Score = 50.0 bits (114), Expect = 3e-05
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 437
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 438 NGPGAFRCYLDVGLARTTTGARV 506
A R +LD+GLAR+T GARV
Sbjct: 130 GEKKAPRVFLDIGLARSTRGARV 152
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +1
Query: 55 NKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 234
N Y R+++K + RR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 235 IXGDHIV 255
+ GD I+
Sbjct: 69 VDGDFIL 75
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 56.8 bits (131), Expect = 3e-07
Identities = 34/83 (40%), Positives = 39/83 (46%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 438 NGPGAFRCYLDVGLARTTTGARV 506
N F+ LDVG+ TTG RV
Sbjct: 86 NERRPFKALLDVGVKNVTTGNRV 108
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.4 bits (130), Expect = 3e-07
Identities = 44/131 (33%), Positives = 59/131 (45%)
Frame = +1
Query: 79 QVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGDHIVA 258
+++F+ +EGKTDYYARKRL +QDKN+YNTP+ + +
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXDDSSCNXQRYHLPDCIXKKFXSS---V 92
Query: 259 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 438
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 93 PCMHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 439 MDQEHLDVIWM 471
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 52.0 bits (119), Expect = 7e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTG 335
CAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 26 CAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.4 bits (110), Expect = 9e-05
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +1
Query: 73 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGDHI 252
RY+V + RREGKT+YY R RLV + K R+ VR+SN+ + Q +RI GD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 253 VA 258
+A
Sbjct: 59 IA 60
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 42.3 bits (95), Expect = 0.006
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +1
Query: 73 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGD 246
RY V F+ R EGKTDYY R L+ TP R++VR +N+ + Q+ + GD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 39.1 bits (87), Expect = 0.057
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 73 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGDHI 252
RY+V + RRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 253 VA 258
+A
Sbjct: 59 LA 60
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 38.3 bits (85), Expect = 0.099
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 70 KRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGDH 249
K +++FK RR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 250 IV 255
++
Sbjct: 58 VI 59
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 204
M + K++KN YF ++ VK + R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 205 DVTCQVAYSRIXGDHIVA 258
+++ + +S + GD IVA
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.5 bits (83), Expect = 0.17
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 76 YQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGD 246
Y+V+FK RREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 36.7 bits (81), Expect = 0.30
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +1
Query: 73 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIXGD 246
RY+V F+ RREG+T+Y+ R +L++ ++ R++VR S ++V Q+ GD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 35.5 bits (78), Expect = 0.70
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 211 TCQVA 225
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 5890
Score = 31.9 bits (69), Expect = 8.6
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -2
Query: 294 SHHNVATHVNKQRNNMVTXNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNNEAFTSIII 115
SH NV +NK++ N+ N ++ +L +I N+ IF C + N+ F I+
Sbjct: 701 SHQNVK-EINKEKINVTKVNFKIYYLISHIHYSYLFNKDIFICGNY----RNQHF---IV 752
Query: 114 SFPFTTXLEFYLVPLEVLFVLHNFNESHILNLSYK 10
L +Y +P E + N ++++ +Y+
Sbjct: 753 HIKSDFFLLYYALPFEEEINIKNVTQTNVATNTYE 787
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,324,262
Number of Sequences: 1657284
Number of extensions: 8581714
Number of successful extensions: 19706
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19684
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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