Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00804
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   143   4e-36
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   1.9  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   3.4  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   3.4  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   3.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  143 bits (346), Expect = 4e-36
 Identities = 63/75 (84%), Positives = 70/75 (93%)
 Frame = +1

Query: 31  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
           MGFVKVVKNKQYFKRYQV+F+ RREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 211 TCQVAYSRIXGDHIV 255
           TCQ+AY RI GD IV
Sbjct: 61  TCQIAYRRIEGDRIV 75



 Score =  107 bits (257), Expect = 2e-25
 Identities = 53/84 (63%), Positives = 54/84 (64%)
 Frame = +3

Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
           CAAYSHELPRYGVKVGLTNYAAAY TG                          EY VEPV
Sbjct: 76  CAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPV 135

Query: 435 DNGPGAFRCYLDVGLARTTTGARV 506
           D GP AFRCYLDVGLARTTTG+RV
Sbjct: 136 DEGPAAFRCYLDVGLARTTTGSRV 159


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 327 NMLQHNLSDQPSHHNVATHVNKQRNNMVTXNP 232
           +M   +++D PS   + T VN   N M   NP
Sbjct: 525 HMNTSSMNDSPSPTTILTSVNSSGNYMCRSNP 556


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 369 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRN 253
           ++ EAV V  A+  NM+  ++S+QP   +    + K RN
Sbjct: 110 ELMEAVDVA-AELKNMVLQDISNQPKQQSTTRPLRKCRN 147


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 369 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRN 253
           ++ EAV V  A+  NM+  ++S+QP   +    + K RN
Sbjct: 111 ELMEAVDVA-AELKNMVLQDISNQPKQQSTTRPLRKCRN 148


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 373 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 456
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 141 CSGQEQI*HT*ISSDCASLQQRCNMP 218
           C G   I H    S+CA   QRC+ P
Sbjct: 553 CGGAHHIGH----SECARSAQRCSRP 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,164
Number of Sequences: 2352
Number of extensions: 9934
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)