Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00803
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   2.0  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    25   3.4  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   6.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   6.1  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 170 SRYESNCKKLDRGSNLEVGSKRRQLWDLC 256
           S++ ++C  L R S  E+G   + LW LC
Sbjct: 58  SKHHTHCTGLSRDSTRELGRNNQLLW-LC 85


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 257 MPFDSCCPDCKLPGDDCPLVWGACSHC 337
           MP  +C  DCK    +C    G  S C
Sbjct: 1   MPCKTCVADCKCTSPNCGAGCGCESRC 27


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 67  QFLSVLNICLSVYVLI 20
           QF+++L+IC SV+ L+
Sbjct: 162 QFVAILSICASVFTLM 177


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.0 bits (42), Expect(2) = 6.1
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 703 GRRDSDQHHHRPHPY 747
           G      HHH  HP+
Sbjct: 179 GHSQHHHHHHHHHPH 193



 Score = 20.6 bits (41), Expect(2) = 6.1
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +1

Query: 724 HHHRPHPYTTSGHAPPQ 774
           HHH PH       A P+
Sbjct: 188 HHHHPHHSQQQHSASPR 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,986
Number of Sequences: 2352
Number of extensions: 15156
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)