Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00803
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 86 2e-17
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 56 2e-08
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 39 0.005
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 37 0.014
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 36 0.032
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 36 0.042
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 34 0.098
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 34 0.098
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 33 0.17
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.17
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 33 0.17
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 33 0.30
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 33 0.30
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 33 0.30
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 32 0.40
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 32 0.40
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z46794-2|CAA86774.1| 950|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.52
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.52
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 31 0.69
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 31 0.91
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 30 1.6
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.6
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 2.8
AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 29 2.8
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 29 3.7
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 29 4.9
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 29 4.9
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 29 4.9
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 29 4.9
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 29 4.9
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 6.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 28 8.5
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 28 8.5
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 86.2 bits (204), Expect = 2e-17
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +2
Query: 257 MPFDSCCPDCKLPGDDCPLVWGACSHCFHIHCIVKWL---HSQPQQQCPMCRQDW 412
M F+S C CK PGDDCPLV G C H FH HCI KW+ +QP+ QCP+CRQDW
Sbjct: 77 MEFESACNMCKFPGDDCPLVLGICRHAFHRHCIDKWIAAPTNQPRAQCPLCRQDW 131
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 233 RRQLWDLCMPFDSCCPDCKLPG--DDCPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
R + DLC+ C + G D+C + WG C+H FH HCI +WL + +Q CP+ +
Sbjct: 48 RNHIMDLCIE----CQANQAAGLKDECTVAWGNCNHAFHFHCISRWL--KTRQVCPLDNR 101
Query: 407 DWKF 418
+W+F
Sbjct: 102 EWEF 105
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VKSWTGVATWRWVANDDNCGICVCHLI 269
VK W+ VA W W DNC IC H++
Sbjct: 26 VKKWSAVALWAWDIQVDNCAICRNHIM 52
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 233 RRQLWDLCMPFDSCCPDCKLPG--DDCPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
R + DLC+ C + G D+C + WG C+H FH HCI +WL + +Q CP+ +
Sbjct: 39 RNHIMDLCIE----CQANQAAGLKDECTVAWGNCNHAFHFHCISRWL--KTRQVCPLDNR 92
Query: 407 DWKF 418
+W+F
Sbjct: 93 EWEF 96
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VKSWTGVATWRWVANDDNCGICVCHLI 269
VK W+ VA W W DNC IC H++
Sbjct: 17 VKKWSAVALWAWDIQVDNCAICRNHIM 43
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 51.2 bits (117), Expect = 8e-07
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 275 CPDCKL-PGDDCPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCRQDW 412
C C+ P +C +VWG C+H FH C+ +W+ + +CP+C++DW
Sbjct: 61 CLRCQSEPSAECYVVWGDCNHSFHHCCMTQWI--RQNNRCPLCQKDW 105
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 189 VKSWTGVATWRWVANDDNCGICVCHLI 269
+K W +A W W D C IC HL+
Sbjct: 32 LKKWNALAVWAWDVECDTCAICRVHLM 58
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD-WKFNN 424
CSH FH HC+ W Q QQ CP CR D W+ N
Sbjct: 310 CSHVFHAHCLRSWF--QRQQTCPTCRTDIWQGRN 341
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 38.7 bits (86), Expect = 0.005
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQDW 412
C + FH +C+ KW S Q CP+CR ++
Sbjct: 1417 CKNKFHSNCLYKWFESSNQSTCPLCRNNF 1445
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD 409
C+H FH CI KWL ++CPMCR++
Sbjct: 451 CNHVFHPECIYKWL--DINKRCPMCREE 476
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQDWK 415
C H FH C+ WL + QQ CP CRQ K
Sbjct: 111 CKHRFHYFCLTLWL--EAQQTCPTCRQKVK 138
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 35.9 bits (79), Expect = 0.032
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD 409
C+H F CI +W+ + CPMCR+D
Sbjct: 85 CNHSFCFSCISEWVCQSLRPSCPMCRKD 112
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ-----DWKFNN 424
C+H FH CI WL + + CP+CRQ +WK N+
Sbjct: 256 CNHIFHRPCIEPWL--KTKNSCPVCRQKVNMKEWKKNH 291
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.098
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C H FH +CI WL +Q ++ CP+C++
Sbjct: 265 CRHVFHCNCIDVWL-TQTRKICPLCKR 290
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 34.3 bits (75), Expect = 0.098
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 275 CPDCKLPGDD---CPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C C DD P + C H F C+ WL S Q CPMCR+
Sbjct: 34 CSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKS--QDTCPMCRE 78
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Frame = +2
Query: 326 CSHCFHI----HCIVKWLHSQPQQQCPMCRQDW 412
C+ C ++ C+ +W S Q CP+CR+ W
Sbjct: 223 CNRCMNVIGCKTCVQRWHRSSTQPSCPLCRRRW 255
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.17
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 350 CIVKWLHSQPQQQCPMCRQDWKFN 421
C+ KW + + CP+CR +WK +
Sbjct: 180 CVKKWFDTSASKACPLCRFEWKLH 203
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCR 403
CSH FH C+ +L + Q CP CR
Sbjct: 393 CSHIFHEKCLHTYLLQRTDQTCPKCR 418
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 302 DCPLVWGACSHCFHI----HCIVKWLHSQPQQQCPMCRQDW 412
+ P+ C+ C I CIV W H CP+CR+ W
Sbjct: 352 EVPIEPQGCNRCQQIIGCSACIVHWHHHALSPSCPLCRRRW 392
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C FH+ C KWL+ +++CP CR+
Sbjct: 1044 CRRRFHLECATKWLNE--KRECPTCRK 1068
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C FH+ C KWL+ +++CP CR+
Sbjct: 1078 CRRRFHLECATKWLNE--KRECPTCRK 1102
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C H +H CI +W+ + ++QCP CR+
Sbjct: 31 CGHIYHHGCISQWIAT--KRQCPSCRR 55
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C FH+ C KWL+ +++CP CR+
Sbjct: 753 CRRRFHLKCATKWLNE--KRECPTCRK 777
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +2
Query: 326 CSHCFHI----HCIVKWLHSQPQQQCPMCRQDW 412
C++C I C+ W S + CP+CR+ W
Sbjct: 287 CNNCLQIIGCEECVDIWYRSSSKPSCPLCRRKW 319
>Z46794-2|CAA86774.1| 950|Caenorhabditis elegans Hypothetical
protein R06F6.2 protein.
Length = 950
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 275 CPDCKLPGDDCPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCR 403
C C P P V C H +H+HC + + +CP C+
Sbjct: 773 CSACDTPLQ-LPTVHFLCKHAYHVHCFESY-NMDGSDKCPACQ 813
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQ-CPMCR 403
C H F C+ +WL ++P Q CP+C+
Sbjct: 41 CGHLFCWPCLSQWLDTRPNNQVCPVCK 67
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 323 ACSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
+C H FH CI W+ Q CP C++
Sbjct: 332 SCGHVFHEFCIRGWVVVGKLQTCPYCKE 359
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD 409
C H +H CI WL + CPMC+ D
Sbjct: 245 CKHIYHKSCIDPWL--LEHRTCPMCKND 270
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD 409
C H FH C+ WL S +++CP+C+ D
Sbjct: 335 CGHEFHPKCVDPWLLS--KRRCPLCQFD 360
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 31.1 bits (67), Expect = 0.91
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMC 400
C+ +H HC +WL +P CP C
Sbjct: 547 CTEIYHSHCATQWLSQKP--TCPKC 569
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQ 406
C FH C KWL+ +++CP CR+
Sbjct: 460 CRRRFHSKCATKWLNE--KRECPTCRK 484
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCR 403
CSH FH C++ WL CP CR
Sbjct: 350 CSHQFHDWCLMWWL--AQDSSCPTCR 373
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCR 403
CSH FH C++ WL CP CR
Sbjct: 350 CSHQFHDWCLMWWL--AQDSSCPTCR 373
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQDWKF 418
C H F CIV WL CPMC+ F
Sbjct: 57 CCHEFCYDCIVGWLTKGSGPFCPMCKTPVSF 87
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 275 CPDCKLPGDDCPLVWGACSHCFHIHCIVKWLHSQPQQQCPMCR 403
C C DD L C+H FH C+ +W CP+CR
Sbjct: 260 CAVCLERMDDSVLAI-LCNHSFHARCLEQW----ADNTCPVCR 297
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQDWKFNNK 427
C+ +H HCI +WL + CP C + K N+
Sbjct: 2126 CTREYHYHCISRWL--KINSVCPQCSRALKDPNE 2157
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQDWKFNNK 427
C+ +H HCI +WL + CP C + K N+
Sbjct: 2126 CTREYHYHCISRWL--KINSVCPQCSRALKDPNE 2157
>AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical
protein C35E7.3 protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Frame = +2
Query: 176 YESNCKKLDR----GSNLEVGSKRRQLW-DLCMPFDSC-CPDC 286
Y+ NCKKLD G + E G R+ L+ + + F+ CPDC
Sbjct: 282 YKDNCKKLDMPIYFGYHFEEGKTRKYLFNNRTLQFERIKCPDC 324
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical
protein C06B8.7 protein.
Length = 3118
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = -2
Query: 770 GGACPEVVYGWGRWWCW---SESRRPFQLSPPRRHGLAQT----PQFGQQRQIQLTQ 621
G AC + Y G +W W + PF + P HG A+ P F ++I+L++
Sbjct: 164 GTACRSMGYSDGGFWKWFRRNNDTYPFVMPKPDCHGAAKNLWDCPAFSNPQKIRLSE 220
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 326 CSHCFHIHCI--VKWLHSQPQQQCPMCRQDWKFN 421
C H F CI V+ + P +CP CR + K N
Sbjct: 41 CGHTFCTECIRNVQNYGNSPHLECPTCRAETKSN 74
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 433 HSLRKQFRAISTMSLQGLPPLPKSLMASQKTI 528
H + ++F+ ++ +LQGL PLPK+L+ + T+
Sbjct: 288 HQVDREFKIMN--ALQGLVPLPKTLLYDETTL 317
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
Frame = +2
Query: 314 VWGACSHCFHIHCIVKW---------LHSQPQQQCPMCRQ 406
+ C HCF + CI +W L ++ + CP CRQ
Sbjct: 229 ILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCPECRQ 268
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
Frame = +2
Query: 314 VWGACSHCFHIHCIVKW---------LHSQPQQQCPMCRQ 406
+ C HCF + CI +W L ++ + CP CRQ
Sbjct: 229 ILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCPECRQ 268
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMC 400
C H FH C+ KWL + CP+C
Sbjct: 620 CKHYFHGPCLRKWL--AVKMVCPLC 642
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 326 CSHCFHIHCIVK-WLHSQPQQQCPMCRQDW 412
C+ CF + + W S CP+CR W
Sbjct: 297 CAKCFRWWTVFRCWWQSSLNPSCPLCRLKW 326
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 RRQLWDLCMPFDSCCPDCKLPGDDCPLVWGACSHCFHIHCIVKWLHSQPQQQ--CPMCRQ 406
+R W C+ SC DD L C +H++C+ L P + C +C+
Sbjct: 302 KRSGWQ-CLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEYSCRLCQV 360
Query: 407 DW 412
++
Sbjct: 361 EF 362
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 383 VEAESVATLQYSECGNSESKHPKLEGSRPQVVCSLDSS 270
+E + ++Y++ GNSESK+ E + + L SS
Sbjct: 589 MEVHNFGAVKYAKLGNSESKYSMTEKAAESRIAELQSS 626
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 326 CSHCFHIHCIVKWLHSQPQQQCPMCRQD 409
C+H F CI WL + CP+CR +
Sbjct: 352 CTHVFCKFCIETWL--DQKSTCPICRAE 377
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 341 HIHCIVKWLHSQPQQQCPMCRQDWKF 418
H C+V+WL ++ C +C + F
Sbjct: 77 HQECLVEWLKYSKKEVCELCNHKYSF 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,678
Number of Sequences: 27780
Number of extensions: 346640
Number of successful extensions: 1085
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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