Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00802
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 37 0.018
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 31 0.68
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 30 1.6
SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 30 2.1
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 30 2.1
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 29 2.7
SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 3.6
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41465| Best HMM Match : rve (HMM E-Value=0.0025) 29 4.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 28 6.3
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 28 6.3
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 28 6.3
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 28 6.3
SB_34519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 28 8.4
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 486 TLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTD 665
T T S TT T T+ TT T ST T+S T T+ T + I+ T +T
Sbjct: 84 TTTTTTFSATTTTTTITTTTTTTTTIST-TISTTTTTTTISTTTTTITAVIISTTTTTTS 142
Query: 666 AGTASTVT 689
+T+T
Sbjct: 143 TANTTTIT 150
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 477 AYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETR 656
A T T + TT T+T+ TT+ T T T+ T I+ P +TA+ + T
Sbjct: 144 ANTTTITATITTTTTTITITATITTITTTITATI---TTTISTTTPFITATISTTITTTI 200
Query: 657 STDAGTASTVT 689
+T +T T
Sbjct: 201 TTTTTITTTTT 211
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 468 YVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSA--DTAGITVDGPKVTASTANI 641
YV+ + + T + TT + T T T +T T+S T T T + +
Sbjct: 73 YVKIDGSQNGTTTTTTTFSATTTTTTITTTTTTTTTISTTISTTTTTTTISTTTTTITAV 132
Query: 642 ADETRSTDAGTASTVTL 692
T +T TA+T T+
Sbjct: 133 IISTTTTTTSTANTTTI 149
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
T S T T TV A TT +T T + A T VTASTA++ +T + A T +
Sbjct: 1132 TASVVTTTATVAAATTTAEKATTTTAAMVKA--TTTAAAVTASTASVVTKTATVAAATTT 1189
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
T S T+T TV A TT + T++A T VTASTA++ T + + T +
Sbjct: 1173 TASVVTKTATVAAATTT--AEKATTLTAAMVEATTTAAAVTASTASVV--TTTAEKATTT 1228
Query: 681 TVTL 692
T +
Sbjct: 1229 TAAM 1232
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +3
Query: 63 SPLSPMPTNLAA*ISTLGHGYRPRTETNLPRSWTISSHRPERPNNQTSIRPPIAGHLLPR 242
SPL + L +L + P E+ L SW +S P++P N I +G P
Sbjct: 1093 SPLKYQQSRLEHSFDSLVQHHSPLPESQLRHSWPKTSETPQKPENDPVIPRRTSGSHGPS 1152
Query: 243 KVRTHPDND 269
DN+
Sbjct: 1153 LATPKSDNE 1161
>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1346
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 406 TKITQSKTETIPPATKDATATTSRPTKHYTIRPIV--ERQKP 525
T+ T+ +TET ATK AT TT+ TK T IV E KP
Sbjct: 1201 TEATKPETETTTEATKPATETTTIATKAATKATIVATEATKP 1242
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 406 TKITQSKTETIPPATKDATATTSRPTKHYT 495
T+ T++ TET ATK T TT+ TK T
Sbjct: 1190 TEATKAATETTTEATKPETETTTEATKPAT 1219
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 477 AYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETR 656
A +T T S +T T T A TT + +T T + + T + VTA+ ++ET
Sbjct: 236 AAETTPTTTTSASTTTATTTKATTTSVSTTTATTKEEESTTTAETTTVTATKPLSSEETS 295
Query: 657 STDAGTASTVTLDS 698
+ TA T D+
Sbjct: 296 TMLPTTAPTPKPDT 309
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 504 HSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTAS--TANIADETRSTDAGTA 677
+++TT+ T D DTT + D+T T T T S T + D T D T
Sbjct: 243 NNKTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTSNDTTSDNDTTSDNDTTTN 302
Query: 678 STVTLDS 698
+ T D+
Sbjct: 303 NDTTSDN 309
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Frame = +3
Query: 483 KTLHNPTHS---RTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTA--STANIAD 647
KT N T S TT+ T D DTT N D+ T+ T T+ T D
Sbjct: 245 KTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTSNDTTSDNDTTSDNDTTTNND 304
Query: 648 ETRSTDAGTASTVTLDS 698
T DA + + T ++
Sbjct: 305 TTSDNDATSDNDTTTNN 321
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
++ T++ T D DTT N D+T A + T T+ +D ++D T +
Sbjct: 284 SNDTTSDNDTTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSDNDTTSDNDTTT 343
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Frame = +3
Query: 474 EAYKTLHNPTHSRTTETLTVQDADTT------LN-TDSTETVSADTAGITVDGPKVT--- 623
E+ T HN TH T+T A+ T LN TD++ A+ V P +T
Sbjct: 1626 ESNVTSHNVTHLNITDTSNATQANVTNHNVTHLNITDTSNATQANVTNHNVKQPNITDAG 1685
Query: 624 -ASTANI----ADETRSTDAGTASTVTLDS 698
A+ AN+ + TDAG A+ + S
Sbjct: 1686 NATKANVISHNVKQPNITDAGNATQANVTS 1715
>SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 477 AYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETR 656
A T T + TT T+T+ TT+ T T T+ T I+ P +TA+ + T
Sbjct: 3 ANTTTITATITTTTTTITITATITTITTTITATI---TTTISTTTPFITATISTTITTTI 59
Query: 657 STDAGTASTVT 689
+T +T T
Sbjct: 60 TTTTTITTTTT 70
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 278 KNVLRTRKKSPRKLSRLFRQRTPQPRHHQKPKR 376
K+ LR+R +SP ++ R R P+ R Q P+R
Sbjct: 328 KSRLRSRSRSPYRIRYRSRSRPPRGRRSQSPRR 360
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 516 TETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRST---DAGTASTV 686
T T T A T T ST TV+A TA +TV T TA + T T A A+TV
Sbjct: 179 TATATAT-ATATATTTSTATVTA-TATVTVTATAATTVTATVTAATTVTVTVTATAATTV 236
Query: 687 TL 692
T+
Sbjct: 237 TV 238
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 105 STLGHGYR-PRTETNLPRSWTISSHRPE---RPNNQTSIRPPIAGHLLPRKVRTHP 260
S LG+ R ++TN + T+ HRP P + RPPI H P V HP
Sbjct: 920 SKLGNTSRNSSSDTNAAKKTTVIVHRPPILFHPPSHLIHRPPIILHRPPLIVHRHP 975
>SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1368
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 468 YVEAYKTLHNPTHSRTTETLTVQDADTTLNTDS-TETVSADTAGITVDGPKVTASTANIA 644
Y A H+ +H++ T A T +T S T+ ++DT D + T + A
Sbjct: 1283 YHTANDNKHSTSHTKHLTNDTYHTASDTKHTASDTKHTASDTKHTASDTKHTASDTKHTA 1342
Query: 645 DETRSTDAGTASTVT 689
+T+ T + T T +
Sbjct: 1343 SDTKHTASDTKHTAS 1357
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 513 TTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVT-ASTANIADETRSTDAGTASTVT 689
T T +TTL +ST + + A T PK T AS A +A E+ + + A T
Sbjct: 2719 TAAPYTTLAPETTLAPESTVALESTVASETTVAPKTTAASEATLAPESVAPETTAAPEST 2778
Query: 690 L 692
L
Sbjct: 2779 L 2779
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 677 RGTSVRGSRLVCYVRRRSSNFRPIYRNTSRISGNCFCTIRIQCRVCVLNRK 525
R S G R R+ SN RP + + SGN T + + V +RK
Sbjct: 143 RNISETGLRTSATSRKTFSNIRPTSETSRKTSGNSGTTTAVSLTISVSSRK 193
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +3
Query: 459 DRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTAN 638
DR ++ + + PT T +DTT + T +S+DT ++ D ++ T
Sbjct: 63 DRTFLSPTQPSYPPTQPYYPPTAPFLSSDTTFLSSDTTFLSSDTTFLSSDSTFLSPDTTF 122
Query: 639 IADETRSTDAGT 674
++ +T + T
Sbjct: 123 LSSDTTFLSSDT 134
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 552 LNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTASTVTLD 695
++TD T S T G TVD +T + + STD TA+ +++D
Sbjct: 2053 MSTDGTTVSSMSTDGTTVDPMSTDGTTVS----SMSTDGATAAPMSMD 2096
>SB_41465| Best HMM Match : rve (HMM E-Value=0.0025)
Length = 217
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +3
Query: 453 RRDRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTAST 632
RR R A LH H AD +S VS + AGI +GP
Sbjct: 35 RRGRLMALAAGALHIARHVDCRADTGTASADARSQRESAAVVSRELAGIYEEGPLTWPKV 94
Query: 633 ANIADETRSTDAGT 674
+ D T A T
Sbjct: 95 LMVDDGTEFKGATT 108
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 477 AYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETR 656
A +T P + ET Q+ TT+ +STE A + + P+ TA IA ET
Sbjct: 5177 APETTVAPETTMAPETTVPQE--TTIAPESTEAPETTRAPESTEAPETTAPETTIAPETT 5234
Query: 657 STDAGTASTVT 689
T + T
Sbjct: 5235 IAPETTVAQET 5245
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 498 PTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTA 677
P+ +++ +LT+ D D+ TE AD+ + V + D T+ +D A
Sbjct: 100 PSRAKSPLSLTISDGDSASTCSETEEDKADSLRVHPSAHHVRHMSVESTDSTKMSDDSLA 159
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 129 PRTETNLPRSWTISSHRPERPNNQTSIRPPIAGH---LLPRKVRTHPDNDDPRR 281
PR + NLP++ T S RPE P + I+PP+A PR + PD RR
Sbjct: 243 PR-KPNLPQTHTPQSRRPEEPQD---IQPPMAPETPGTPPRPSTSTPDKGLHRR 292
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 165 ISSHRPERPNNQTSIRPPIAGHLLPRKVRTHPDNDDPRRTYYVREKNLHEN*VDCSGNEP 344
IS+ PER +Q ++ LPR HP N + R V + +N S N P
Sbjct: 2175 ISTAMPERQLHQVAVEEN-----LPRFHHRHPGNLNRERNLEVVSSRVEQNICSTSANIP 2229
Query: 345 -HSHDITKN 368
HS +T +
Sbjct: 2230 LHSSSVTSS 2238
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 453 RRDRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTAST 632
RR ++ + Y + PT TT+T +DT+ + TE S AG T+ T
Sbjct: 497 RRLKHLIMEYLGMSPPT---TTDTDMYSTSDTSFD---TEDDSVGRAGPKSGTTNTTSMT 550
Query: 633 ANIADETRSTDAGTAST 683
N+A T S + T+ST
Sbjct: 551 INMAARTWSRRSHTSST 567
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 480 YKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRS 659
Y T + T + T T+T+ + TT+NT T T +T+ +T + I T S
Sbjct: 400 YTTTVSTTITNYTTTITINNYTTTVNTTITTNY---TTIVTI---TITTNYTTIVTITIS 453
Query: 660 TDAGTASTVTL 692
T+ T T+T+
Sbjct: 454 TNYTTIVTITI 464
>SB_34519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 412 ITQSKTETIPPATKDATATTSRPTKHYTIRPIVERQKPLRFKTQTRH*IRIVQKQF 579
IT +T+T+ + D T SR YT R I + R+ ++RH IV KQ+
Sbjct: 67 ITAQRTQTLQALSLDGM-TASR--SQYTFRVITPLKYTTRYGGKSRHLAPIVLKQY 119
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 400 HETKITQSKTETIPPATKDATATTSRPTKHYT 495
H+T T + T T PAT A ATT+ P Y+
Sbjct: 132 HKTTTT-APTTTTAPATNTAPATTTAPNNDYS 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,591,844
Number of Sequences: 59808
Number of extensions: 427914
Number of successful extensions: 1533
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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