Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00802
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 40 0.002
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 38 0.009
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 35 0.064
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.20
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 32 0.45
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 1.0
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 31 1.0
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 31 1.0
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 31 1.0
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 30 1.4
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 30 1.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.4
U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 28 5.6
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 28 5.6
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 7.4
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 7.4
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 28 7.4
AL032623-3|CAA21509.1| 317|Caenorhabditis elegans Hypothetical ... 28 7.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 7.4
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 28 7.4
AF016451-11|AAB65999.1| 327|Caenorhabditis elegans Hypothetical... 28 7.4
U43283-5|AAC69019.1| 80|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +3
Query: 486 TLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTD 665
T PT + TT T T + TT T +TET + T T T T T +T
Sbjct: 121 TTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTT 180
Query: 666 AGTASTVT 689
T +T T
Sbjct: 181 TPTTTTTT 188
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 486 TLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTD 665
T T + TTET T +TT T +T T + T T + T + ET +T
Sbjct: 96 TTTTTTPTTTTETTTTPTTETT-TTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTP 154
Query: 666 AGTASTVT 689
T +T T
Sbjct: 155 TTTTTTPT 162
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/71 (33%), Positives = 33/71 (46%)
Frame = +3
Query: 486 TLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTD 665
T T TTE T ++ TT T S + + T TVD T ++ A ET +T
Sbjct: 829 TTEKTTSKTTTEKPTTSESATTETTTSEPSTTEST---TVDTSSATTEESSTAAETTTTS 885
Query: 666 AGTASTVTLDS 698
A T+ T T +S
Sbjct: 886 AETSETTTSES 896
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 495 NPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGT 674
+PT T++T TV TTL+ +STE+ ++ + T D T+S + E S+ + +
Sbjct: 719 SPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTTPDFIGFTSSVSR-TSEQYSSSSPS 777
Query: 675 ASTVTLD 695
+ T T+D
Sbjct: 778 SDTTTMD 784
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 507 SRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVT-ASTANIADETRSTDAGTAST 683
S T T TV + +T+ T + + S + T++ T STA+ + + ST ++ST
Sbjct: 288 STVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSST 347
Query: 684 VT 689
+T
Sbjct: 348 IT 349
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 495 NPTHSRTTETLTVQDADTTLNTDSTETVSADTA-GITVDGPKVTASTANIA-DETRSTDA 668
+P+ S T T+T + +T T T T S T+ TV ST+ + ST +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 669 GTAST 683
TAS+
Sbjct: 512 STASS 516
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 507 SRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVT-ASTANIADETRSTDAGTAST 683
S T T TV + +T+ T + + S + T++ T STA+ + + ST ++ST
Sbjct: 288 STVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSST 347
Query: 684 VT 689
+T
Sbjct: 348 IT 349
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 495 NPTHSRTTETLTVQDADTTLNTDSTETVSADTA-GITVDGPKVTASTANIA-DETRSTDA 668
+P+ S T T+T + +T T T T S T+ TV ST+ + ST +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 669 GTAST 683
TAS+
Sbjct: 512 STASS 516
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
T T T + + +T S TVS + T GP T+ + + T+ST +G ++
Sbjct: 546 TSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTSGPSTTSGSTKSTTSGPST 605
Query: 681 T 683
T
Sbjct: 606 T 606
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
T +T T Q + +T T+S ++ T GP ++ + +ST +GT
Sbjct: 438 TSGPSTTLGTTQSTTSGPSTTPGSTISTTSSASTTSGPSTSSGSTVSTTSGQSTSSGTTK 497
Query: 681 TVT 689
+ T
Sbjct: 498 STT 500
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 465 YYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGIT--VDGPKVTASTAN 638
Y V + TL T + TT + + T +T+ T S DT+ T GP + ST
Sbjct: 2763 YTVSSDGTLEPITSAPTTIGSSSEGPTTATSTEPIYTASPDTSPETEATIGPPIRISTVG 2822
Query: 639 IADETRSTDAGTASTVTLDS 698
D ++ G STVT S
Sbjct: 2823 GGDTYVTSTPGQGSTVTTQS 2842
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 31.1 bits (67), Expect = 0.79
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAS 680
T S TT + T + TTL+T +T V + T +TV P +T + + T+ + T++
Sbjct: 559 TKSSTTSSTTTKP--TTLSTTTTTQVPSTTTSVTV--PSTQKATPSPSRTTKKSTTTTST 614
Query: 681 TVT 689
T T
Sbjct: 615 TAT 617
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +3
Query: 501 THSRTTETLTVQDADT-TLNTDSTETVSADTAGITVDGPKVTASTANI----ADETRSTD 665
T T T+ +T T+ TD+TE + TA T T +NI DE T
Sbjct: 450 TEQPKTTTIVASSTETSTVTTDATEATTTTTAPTTTVATTTTKKRSNIPEAEEDEIEETA 509
Query: 666 AGTASTVTLD 695
T + VT D
Sbjct: 510 EKTTTKVTED 519
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 NPTHSRTTETL-TVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADET 653
N H TT +L T Q TT+ STET S T T TA T +A T
Sbjct: 438 NKPHKETTTSLATEQPKTTTIVASSTET-STVTTDATEATTTTTAPTTTVATTT 490
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +3
Query: 441 AGYERRDRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKV 620
+GY YV +K +N + ++ ST ++ + I + GP
Sbjct: 66 SGYNTNQVDYVLGHKDKYNEGPHYQPPIINSSATAANNSSSSTHHYNSSSQAIPLGGPNQ 125
Query: 621 TASTANIADETRSTDAGTASTVT 689
S+++ ETR T GT + V+
Sbjct: 126 GHSSSSYTTETRVTGGGTGAPVS 148
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +3
Query: 441 AGYERRDRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKV 620
+GY YV +K +N + ++ ST ++ + I + GP
Sbjct: 485 SGYNTNQVDYVLGHKDKYNEGPHYQPPIINSSATAANNSSSSTHHYNSSSQAIPLGGPNQ 544
Query: 621 TASTANIADETRSTDAGTASTVT 689
S+++ ETR T GT + V+
Sbjct: 545 GHSSSSYTTETRVTGGGTGAPVS 567
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +3
Query: 441 AGYERRDRYYVEAYKTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKV 620
+GY YV +K +N + ++ ST ++ + I + GP
Sbjct: 650 SGYNTNQVDYVLGHKDKYNEGPHYQPPIINSSATAANNSSSSTHHYNSSSQAIPLGGPNQ 709
Query: 621 TASTANIADETRSTDAGTASTVT 689
S+++ ETR T GT + V+
Sbjct: 710 GHSSSSYTTETRVTGGGTGAPVS 732
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +3
Query: 483 KTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRST 662
KT + TE + VQ AD D + T P++ T +A +TRS
Sbjct: 439 KTEDEDETNEETEKIEVQQADQAEREDDAASSEGTNRSETAT-PELATDTTAVAKKTRSA 497
Query: 663 DAGTASTVTLD 695
A +T T+D
Sbjct: 498 AARRKNTKTVD 508
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +3
Query: 483 KTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRST 662
KT + TE + VQ AD D + T P++ T +A +TRS
Sbjct: 501 KTEDEDETNEETEKIEVQQADQAEREDDAASSEGTNRSETAT-PELATDTTAVAKKTRSA 559
Query: 663 DAGTASTVTLD 695
A +T T+D
Sbjct: 560 AARRKNTKTVD 570
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 483 KTLHNPTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRST 662
K +P S+T+ T T + T +T+S+ +S+ +G T T S A+ + ST
Sbjct: 1408 KASSSPVPSQTSSTPT----NPTGSTESSTLLSSTISGST---QHTTMSKASSGSTSPST 1460
Query: 663 DAGTASTVTLDS 698
++ T STVT+ S
Sbjct: 1461 NSQTGSTVTMGS 1472
>U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical
protein C06G1.2 protein.
Length = 182
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 513 TTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAST 683
TTE T +TT DST T T T + A T A+ T +T T +T
Sbjct: 44 TTEATTTTVVETTTTVDSTTTEVETTP--TTEATTTVAETTTEAETTTTTVESTTTT 98
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 468 YVEAYKTLHNPTHSRTTETLTVQDA-DTTLNTDSTETVSADTAGITVDGPKVTASTA 635
Y + L T+ T T A +TT NTDS+ T + + + P +STA
Sbjct: 21 YTTVARRLKTTIQPSTSTTATSSSATETTSNTDSSSTATPSPSSASSTTPTAQSSTA 77
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 534 QDADTTLNTDSTETVSADTAGITVDGPKVTASTANIADETRSTDAGTAST 683
+D TT TD+T T+S PK + + + E + + T +T
Sbjct: 249 EDTTTTSTTDTTTTISTTKNTTVTQKPKTNTTNSTVTIEETTLEEKTIAT 298
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 415 TQSKTETIPPATKDATATTSRPTKHY-TIRPIVERQK 522
T K+ T P+T TTS PT TI P E QK
Sbjct: 228 TTEKSTTAQPSTTTKPTTTSPPTTQVKTILPATEAQK 264
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 STKTKSTVPATN--PTAXXXXXXXXXXXXXXXXHETKITQSKTETIPPATKDATATTS 474
ST+T STVP+T PT ++ T T T+PP T +T TT+
Sbjct: 176 STRTASTVPSTTVIPTTTRIPTTVTTTTETTTTPQSTTT---TTTVPPTTTTSTTTTT 230
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical protein
C18H2.1 protein.
Length = 1770
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 HETK-ITQSKTETIPPATKDATATTSRPTKHYTIRPIVERQKPLRFKTQTRH 552
H+++ +T+++T I P T +R T+ + P R PL+ T H
Sbjct: 1477 HDSQYVTETRTVMISPKTPGGEYRLARETRTFLREPSTHRNAPLQTTQVTAH 1528
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/43 (27%), Positives = 16/43 (37%)
Frame = -3
Query: 370 WFLVMSWLWGSLPEQST*FSWRFFSRT*YVLLGSSLSGCVRTL 242
W WL S+PE + F W R + + L C L
Sbjct: 340 WLCAFEWLGMSIPEMANNFGWNIDFRWIFACFSAILGQCAVNL 382
>AL032623-3|CAA21509.1| 317|Caenorhabditis elegans Hypothetical
protein Y43F8B.2a protein.
Length = 317
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 629 RSSNFRPIYRNT--SRISGNCFCTIRIQCRV 543
RS +F+ + ++ SR NC CTIR +CR+
Sbjct: 5 RSHHFQFLLKSETFSRKMPNCSCTIRCECRI 35
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 501 THSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVT-ASTANIADETRSTDAGTA 677
T T T ++T+ S TVS T DG + +S + ++ T ST +G +
Sbjct: 1127 TGESTVSGSTGSTGESTILESSVSTVSVSTGSTITDGSTASRSSVSTVSASTESTVSGGS 1186
Query: 678 S 680
S
Sbjct: 1187 S 1187
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 SRTTETLTVQDADTTLNTDSTETVSADTAGIT-VDGPKVTASTANIADETRSTDAGTAST 683
S TTE+L +NT S ET + D + IT + P T + T + T ST
Sbjct: 342 SPTTESLPTSTTTYEMNTTSLETSTTDISTITSTEEPISTTVKTHEQSSTSGMEFSTMST 401
>AF016451-11|AAB65999.1| 327|Caenorhabditis elegans Hypothetical
protein C03A7.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 498 PTHSRTTETLTVQDADTTLNTDSTETVSADTAGITVDGPKVTASTAN 638
PT++ +T T+QD +T S T+ D I P +A+TAN
Sbjct: 29 PTNAVGEDTPTLQDGAQAKHTASPPTLPDDAETIVQSLPTSSATTAN 75
>U43283-5|AAC69019.1| 80|Caenorhabditis elegans Hypothetical
protein T25G12.3 protein.
Length = 80
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 412 ITQSKTETIPPATKDATATTSRPTKHYTIRPIVERQKPL 528
++ + T T P T AT TT T+RPIV +KPL
Sbjct: 26 VSTTTTTTAQPTTAIAT-TTINTIISSTVRPIVVTKKPL 63
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 412 ITQSKTETIP-PATKDATATTSRPTKHYTIRPIVERQKPLRFK 537
+++S++ T+ A + A A T+H+T+ +V++ K +FK
Sbjct: 282 VSRSRSNTLDRKAAESAEAHVVHATEHHTVHHVVKKSKFTKFK 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,589,784
Number of Sequences: 27780
Number of extensions: 295271
Number of successful extensions: 988
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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