Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00799
(771 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 32 0.44
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 31 1.0
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 31 1.0
11_06_0183 - 20999343-20999865,21000351-21000748 31 1.3
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 30 1.8
04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230 30 1.8
05_03_0228 - 10662930-10663417,10663482-10663632 30 2.4
12_01_0003 - 11806-12363,12659-13099 29 4.1
11_01_0004 - 13421-13978,14274-14714 29 4.1
06_03_0743 + 24069752-24070483,24071890-24072345 29 4.1
12_01_0024 + 178539-179418,179593-179938,180127-180244 29 5.4
10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096... 29 5.4
05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-22... 29 5.4
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 29 5.4
03_01_0456 - 3495537-3496205,3496304-3496364,3496447-3496829,349... 29 5.4
10_08_0134 + 15107411-15107939,15108049-15108124,15108332-151084... 28 7.2
04_04_1670 - 35227581-35228168,35228250-35228435,35228529-35228801 28 7.2
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 28 7.2
11_01_0627 - 5047751-5047758,5047799-5048015,5048759-5049646 28 9.5
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 28 9.5
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 28 9.5
03_02_0935 - 12517564-12517650,12517995-12518060,12518156-125181... 28 9.5
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 2 ESKGEALAVSLDIAKAFDRVWHRTLLSKLPSYGIP 106
+SK E + + LD KAFD + H +LS + G P
Sbjct: 446 QSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFP 480
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 8 KGEALAVSLDIAKAFDRVWHRTLLSKLPSYGIPEGLCKMIASFLDGRRSRSL 163
K + L + LD AKAFD V ++L L G P+ I + L +S L
Sbjct: 33 KCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVL 84
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 163 VDGDCSDTMTINAGVPQGSVLSPTLFILYIKTCCLLMACIAMQMIARGMRD 315
++G+ +DT+ + G+ QG +SP LF+L + ++ Q G+R+
Sbjct: 301 INGELTDTVVPSRGIRQGDPISPYLFLLCTEGLSCMLQKKEQQGFLHGIRN 351
>11_06_0183 - 20999343-20999865,21000351-21000748
Length = 306
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +3
Query: 39 SRRPSTGSGIGHFYRSYHLTESPRVSAR*SLAFWMGGDHGRCRR*LF*YHDH*RWRSTRF 218
S P+TG G+ HFY+ E P+ + W+ C + F ++ RWRS
Sbjct: 76 SSAPTTGGGVPHFYK----LEFPKFDGKDDPLNWL----NHCEQ-FFFRTENRRWRSGAD 126
Query: 219 GALPHAFHPVYQDMLSIDGMHCYADDST 302
G LP +++ ++ MH + ST
Sbjct: 127 GNLPS-----HRNSCAVTNMHACSTSST 149
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 8 KGEALAVSLDIAKAFDRVWHRTLLSKLPSYGIPEGLCKMIASFLDGRRSRSL 163
K + + V LD KAFD V +L L G PE I L +S L
Sbjct: 1048 KCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVL 1099
>04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230
Length = 362
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 149 SAHPKS*RSSCRDPRGFRKMVTSIEVSYARPCRRPS 42
+A P S C DP+ ++ I V Y+ CR PS
Sbjct: 28 AASPNSEDGYCADPKKLNALIEDIFVCYSLSCREPS 63
>05_03_0228 - 10662930-10663417,10663482-10663632
Length = 212
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 278 HAINRQHVLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVISAH 141
H +++Q L+ R ++ G P G P+L ++ +P+ TT S H
Sbjct: 17 HDLHQQRTLLDRARAPGLQLPPHGPPSLQ-PIATAAPTATTTFSQH 61
>12_01_0003 - 11806-12363,12659-13099
Length = 332
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 201 WRSTRFGALPHAFHPVYQDMLSIDGMHCYADDSTRDARYIGHQSLSRSVVQERRSK 368
W + G LPH V++D+ ID +H S A ++ LS S ER++K
Sbjct: 269 WHALTSGELPHNIDAVFRDI--IDWLH--HRTSPTSASHVQDHDLSTSFEAERKAK 320
>11_01_0004 - 13421-13978,14274-14714
Length = 332
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 201 WRSTRFGALPHAFHPVYQDMLSIDGMHCYADDSTRDARYIGHQSLSRSVVQERRSK 368
W + G LPH V++D+ ID +H S A ++ LS S ER++K
Sbjct: 269 WHALTSGELPHNIDAVFRDI--IDWLH--HRTSPTSASHVQDHDLSTSFEAERKAK 320
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 450 SLSG*IEPSSIHPIRRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPSCYHLH 286
S SG + S +HP P S P++ + ++SL P + D D + H +H H
Sbjct: 38 SFSG-LYSSYLHPPP--PPSSPPIREALPLLSLTPSTTHDDDHHHRRHDQDHHHH 89
>12_01_0024 + 178539-179418,179593-179938,180127-180244
Length = 447
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 133 LFGWAEITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 246
+F A V+++G ++ GV QG LSP LF+L
Sbjct: 2 VFSTASSAVLLNGVPGNSFKCRRGVRQGDPLSPLLFVL 39
>10_08_0858 -
21108283-21108387,21108820-21108889,21109490-21109646,
21109930-21110062,21110409-21110583,21113353-21113453,
21113620-21113706,21115871-21115931,21116114-21116178,
21116534-21117631
Length = 683
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 231 HAFHPVYQDMLSIDGMHCYADDSTRDARYIGHQSLSRSVVQERRS 365
H+FH + SID + D +++ RY+ H ++ + VV R+
Sbjct: 282 HSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVASHRA 326
>05_01_0033 +
220125-220190,220274-224445,224863-224949,225048-225084,
225296-225356,225666-226918
Length = 1891
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 501 QFQEYPCNLPRVSGYLGLTFRAMSSFGVIWKAKPSWRPKCWESLNRAKV 647
+FQ +PCNL + +G++ A S G+ + R CW + RA V
Sbjct: 14 RFQGFPCNLGKRNGFI-----AARSSGLRRSQQCFHRHLCWPGVRRASV 57
>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +2
Query: 491 HGAAIPGVSLQPSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVP*QSEGASRLDKDF 670
HG V L+ SE + L ++ SD+Q +S L K++ S + G E + D
Sbjct: 743 HGGRQSIVLLEESEPVWKLEFNLISDIQNKSAL-SKSEFTSPLCGQHLSKEIHVKNSGDL 801
Query: 671 CFIKHKSGLAWSTAPISGPGLPNTSFFHLTPTE 769
K ++ + + G + N F L P+E
Sbjct: 802 PLQVTKVKISGADCAVDGFSVDNCKGFSLAPSE 834
>03_01_0456 -
3495537-3496205,3496304-3496364,3496447-3496829,
3496924-3497613
Length = 600
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 561 RAMSSFGVIWKAKPSWRPKCWESLNRAKVLHAW 659
RAM FG++ + + +WRP+ + VL AW
Sbjct: 318 RAMQQFGMMQQPQHAWRPQRGLPESAVSVLRAW 350
>10_08_0134 +
15107411-15107939,15108049-15108124,15108332-15108459,
15108960-15109037,15109734-15110263
Length = 446
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 650 SRLDKDFCFIKHKSGLAWSTAPISGPGLPNTSFFHLTPTE 769
SRL +D FI+H S L W + P + +T+ + +E
Sbjct: 183 SRLPRDLNFIQHTSHLGWKIKKRARPVILDTALYEADRSE 222
>04_04_1670 - 35227581-35228168,35228250-35228435,35228529-35228801
Length = 348
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 532 LGRLQGYSWNCGAMTKGSFFAVNAQT 455
LG+LQG S N G + + S F N+QT
Sbjct: 309 LGQLQGPSGNVGEIRRNSCFVPNSQT 334
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 148 EITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYIKTCCLL 270
E + ++G SD G+ QG LSP LF+L + LL
Sbjct: 214 ETRIDINGTLSDPFKPMRGLRQGDPLSPLLFVLKAMSAGLL 254
>11_01_0627 - 5047751-5047758,5047799-5048015,5048759-5049646
Length = 370
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 715 HLWAGAPKYQLLPFDSYR 768
HLW AP Q+LP D +R
Sbjct: 46 HLWRSAPLLQILPNDGFR 63
>08_02_0550 + 18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -1
Query: 348 PRSERDSDGRYIAHPS---CYHLHSNACHQ 268
P+S+R+ D + I + CY +H+ CHQ
Sbjct: 911 PKSDRELDDKSIQNIQRDLCYFIHNECCHQ 940
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -1
Query: 348 PRSERDSDGRYIAHPS---CYHLHSNACHQ 268
P+S+R+ D + I + CY +H+ CHQ
Sbjct: 664 PKSDRELDDKSIQNIQRDLCYFIHNECCHQ 693
>03_02_0935 -
12517564-12517650,12517995-12518060,12518156-12518185,
12518279-12518377,12518578-12518673,12519221-12519271,
12519358-12519424,12519516-12519610,12519928-12520009,
12520609-12520658,12520741-12520791,12521749-12521832,
12521918-12522028,12522276-12522425,12522858-12522975,
12523118-12523290
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 505 SRSIPATFREYRDTWG*HFERCPVSESFGRQSQVGVQNAGSPLTERRCFTPGQRL--LLY 678
+R I FRE RDT+G R P + +G Q+Q +QN R P R +L
Sbjct: 35 ARPISTGFREERDTFG--PIRVPNDKLWGAQTQRSLQNFDIGGERERMPVPIIRAFGVLK 92
Query: 679 KAQVRPRMEY 708
K + MEY
Sbjct: 93 KCAAKVNMEY 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,317,200
Number of Sequences: 37544
Number of extensions: 613260
Number of successful extensions: 1751
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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