Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00799
         (771 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    33   0.86 
S72487-2|AAD14106.1|  157|Homo sapiens orf3 5' of PD-ECGF/TP pro...    31   6.0  
BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein.      31   6.0  
AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papillo...    31   6.0  
AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papillo...    31   6.0  
AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein.             31   6.0  

>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 33.5 bits (73), Expect = 0.86
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 20  LAVSLDIAKAFDRVWHRTLLSKLPSYGIPEGLC-KMIASFLDGR 148
           + +S+D  KAF+++ HR +L  L   GI EG C K+I +  D R
Sbjct: 26  MIISIDAEKAFNKIQHRFMLKTLNKLGI-EGPCLKIIRAICDKR 68


>S72487-2|AAD14106.1|  157|Homo sapiens orf3 5' of PD-ECGF/TP
           protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -2

Query: 209 GTPALMVMVSEQSPSTT-TVISAHP-KS*RSSCRDPRGFRKMVTSIEVSYARPCRRPSRY 36
           GTP L    + +SPS T T  S  P    +S   +PRGF K    +  S   P R P+R 
Sbjct: 93  GTPDL----NPESPSDTLTRYSVPPYPDLKSQTPNPRGFDKSWLRLPTSPRTPSRVPTRL 148

Query: 35  QGSQQEPRP 9
             S   P P
Sbjct: 149 PRSSSPPHP 157


>BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein.
          Length = 1803

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -1

Query: 426  SSIHPIRRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPSCYHLHSNA 277
            S + P  R +P S  L  Q  +V L+P  +  SD  Y +H S   L SNA
Sbjct: 1246 SKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1294


>AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papilloma
            viruses E6 oncoproteins targeted protein E6TP1 beta
            protein.
          Length = 1804

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -1

Query: 426  SSIHPIRRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPSCYHLHSNA 277
            S + P  R +P S  L  Q  +V L+P  +  SD  Y +H S   L SNA
Sbjct: 1246 SKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1294


>AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papilloma
            viruses E6 oncoproteins targeted protein E6TP1 alpha
            protein.
          Length = 1783

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -1

Query: 426  SSIHPIRRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPSCYHLHSNA 277
            S + P  R +P S  L  Q  +V L+P  +  SD  Y +H S   L SNA
Sbjct: 1225 SKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1273


>AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein.
          Length = 1817

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -1

Query: 426  SSIHPIRRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPSCYHLHSNA 277
            S + P  R +P S  L  Q  +V L+P  +  SD  Y +H S   L SNA
Sbjct: 1260 SKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1308


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,712,785
Number of Sequences: 237096
Number of extensions: 3302642
Number of successful extensions: 11441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11440
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)