Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00798
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   6.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 95  IFVTLNFVTFLKILPLILYPFL 30
           +F+T+NFV  L  L + LY  L
Sbjct: 219 VFITINFVVLLGDLYVTLYIIL 240


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 223 HKCISTPKQNVFCYRVL 273
           HK +S P Q V C+RVL
Sbjct: 129 HK-LSDPNQCVICHRVL 144


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 371 KGCLVDKCFCGMLLQILSLYK 433
           +G LV + FC ++   L++YK
Sbjct: 250 QGILVVQFFCSLVALCLTMYK 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,022
Number of Sequences: 336
Number of extensions: 3548
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)