Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00798
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893...    31   1.3  
01_01_1106 + 8750597-8754031                                           28   9.1  

>02_02_0322 -
           8938101-8938149,8938235-8938458,8938545-8938605,
           8938724-8940761,8940797-8940908,8942037-8942047,
           8942293-8942443
          Length = 881

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 644 PLVSVH--GWHHHPACFCREAVMRFGLKDGGIPCNYN 748
           PL+S H  G++H PAC C     R  L   G P  +N
Sbjct: 387 PLISYHHDGFYHQPACSCLHCYHREFLPVQGPPLGFN 423


>01_01_1106 + 8750597-8754031
          Length = 1144

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 304 KIEQLSQKIDIIVAGKKKNLINKGMSGR*MLLWNV 408
           +IE  S K+D+  A K+ N  NK    +  LLW +
Sbjct: 788 RIECWSHKMDLTTAAKRANWRNKKKLSKLTLLWTI 822


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,370,766
Number of Sequences: 37544
Number of extensions: 332499
Number of successful extensions: 766
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)