Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00798
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.         30   3.9  
AE014296-2426|ABI31252.1|  258|Drosophila melanogaster CG33260-P...    29   5.1  
Y00228-1|CAA68371.1|  944|Drosophila melanogaster protein ( Dros...    29   6.8  
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro...    29   6.8  
BT003273-1|AAO25030.1|  941|Drosophila melanogaster LD15893p pro...    29   6.8  
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P...    29   6.8  
AE014297-1834|AAF55043.1|  941|Drosophila melanogaster CG8573-PB...    29   6.8  
AE014297-1833|AAF55044.1|  941|Drosophila melanogaster CG8573-PA...    29   6.8  

>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
          Length = 1221

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 725  HLSNRNALLLHGKNRQGGGATRAHSQ 648
            H++N N+ L H KN+ GGG    + Q
Sbjct: 1050 HINNNNSDLAHNKNKSGGGGGGGNGQ 1075


>AE014296-2426|ABI31252.1|  258|Drosophila melanogaster CG33260-PB
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 280 QASALKKRKIEQLSQKIDIIVAGKKKNLINKG 375
           Q  ALK  K+ +  + +D I+ GK+K L+ +G
Sbjct: 79  QEEALKTEKLRETERYMDKILTGKRKKLLKQG 110


>Y00228-1|CAA68371.1|  944|Drosophila melanogaster protein (
            Drosophila melanogastersu(Hw) gene for suppressor of
            hairy wing. ).
          Length = 944

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = +1

Query: 448  WPKG*--VVWCVHVEQCTGVRIQAGTNYS-----NEMRTY--QMFTIDFHGEGITSCNKN 600
            WP      V C  +E C     + G NY+     + MR Y   +FT+  H + I S   N
Sbjct: 790  WPNAPEETVLCKVIENCGHDLTKGGENYAELDYGSRMREYCKLLFTVVIHNDSIKSLLNN 849

Query: 601  QTCKVIIYIIIGDRTSCE 654
                 +I  ++GD    E
Sbjct: 850  FPIDDVIEYVLGDEDQDE 867


>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p protein.
          Length = 1188

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 725  HLSNRNALLLHGKNRQGGG 669
            H++N N+ L H KN+ GGG
Sbjct: 1074 HINNNNSDLAHNKNKSGGG 1092


>BT003273-1|AAO25030.1|  941|Drosophila melanogaster LD15893p protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = +1

Query: 448  WPKG*--VVWCVHVEQCTGVRIQAGTNYS-----NEMRTY--QMFTIDFHGEGITSCNKN 600
            WP      V C  +E C     + G NY+     + MR Y   +FT+  H + I S   N
Sbjct: 790  WPNAPEETVLCKVIENCGHDLTKGGENYAELDYGSRMREYCKLLFTVVIHNDSIKSLLNN 849

Query: 601  QTCKVIIYIIIGDRTSCE 654
                 +I  ++GD    E
Sbjct: 850  FPIDDVIEYVLGDEDQDE 867


>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
            protein.
          Length = 1165

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 725  HLSNRNALLLHGKNRQGGG 669
            H++N N+ L H KN+ GGG
Sbjct: 1051 HINNNNSDLAHNKNKSGGG 1069


>AE014297-1834|AAF55043.1|  941|Drosophila melanogaster CG8573-PB,
            isoform B protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = +1

Query: 448  WPKG*--VVWCVHVEQCTGVRIQAGTNYS-----NEMRTY--QMFTIDFHGEGITSCNKN 600
            WP      V C  +E C     + G NY+     + MR Y   +FT+  H + I S   N
Sbjct: 790  WPNAPEETVLCKVIENCGHDLTKGGENYAELDYGSRMREYCKLLFTVVIHNDSIKSLLNN 849

Query: 601  QTCKVIIYIIIGDRTSCE 654
                 +I  ++GD    E
Sbjct: 850  FPIDDVIEYVLGDEDQDE 867


>AE014297-1833|AAF55044.1|  941|Drosophila melanogaster CG8573-PA,
            isoform A protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = +1

Query: 448  WPKG*--VVWCVHVEQCTGVRIQAGTNYS-----NEMRTY--QMFTIDFHGEGITSCNKN 600
            WP      V C  +E C     + G NY+     + MR Y   +FT+  H + I S   N
Sbjct: 790  WPNAPEETVLCKVIENCGHDLTKGGENYAELDYGSRMREYCKLLFTVVIHNDSIKSLLNN 849

Query: 601  QTCKVIIYIIIGDRTSCE 654
                 +I  ++GD    E
Sbjct: 850  FPIDDVIEYVLGDEDQDE 867


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,209,303
Number of Sequences: 53049
Number of extensions: 607850
Number of successful extensions: 1094
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)