Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00797
         (830 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   6.5  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   6.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 417 YRSAHRNIYQQRW-QSNFPYHWKAER 491
           + +  R+IYQ  + +  FP HWK +R
Sbjct: 468 HTAVFRSIYQGCFDRGEFPAHWKIQR 493


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 173 EEMNNVGYENNVSFAYDDLFPALPHSQPLCNVIYNRLQTNF 295
           + ++N   EN+V++  DDL   +P      N  YN L  N+
Sbjct: 162 KNLSNSQGENSVTYTLDDLSNTVP-----VNTQYNALNDNY 197


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 325 FHVPYEERKLDNANTFGEGESLRTCH 402
           +HVPY E +L   N    G+S+   H
Sbjct: 36  YHVPYVEPELPYGNFKEMGKSIHPAH 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 842,161
Number of Sequences: 2352
Number of extensions: 17854
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)