Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00795
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    79   3e-17
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.79 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.4  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 79.0 bits (186), Expect = 3e-17
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +2

Query: 395 LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTK 511
           LQDVYKIGGIGTVPVGRVETGVLKPG +VVFAPANITT+
Sbjct: 1   LQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPANITTE 39



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 511 VKSVEMHHEALQEAVPG 561
           VKSVEMHHEAL EAVPG
Sbjct: 40  VKSVEMHHEALPEAVPG 56


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 463 QHTSFN-SADGHGTNTTDFVYVLQ 395
           ++ SFN +A+GHG NT+   Y  Q
Sbjct: 280 EYNSFNWTANGHGHNTSSHNYYAQ 303


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 346 IESFNEAFSVSFAFFTLH 293
           I++FN+ F  SF  FTL+
Sbjct: 271 IDAFNDIFGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 346 IESFNEAFSVSFAFFTLH 293
           I++FN+ F  SF  FTL+
Sbjct: 197 IDAFNDIFGWSFLLFTLY 214


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 588 VLYVETYIVSRYSFLESFVVHLHRFDLVVMLAGAKTTMV 472
           VLY   +  SR S +  F+ HL   DL V L    T ++
Sbjct: 45  VLYTLLFGRSRKSRMNYFITHLALADLSVGLINVLTDII 83


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 508 SSDVGGGKDNNGTWFQHTSF 449
           ++ V GG +NNGT   H+ F
Sbjct: 182 AAQVSGGNNNNGTPGGHSGF 201


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 218  ESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 90
            +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1267 QSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 218  ESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 90
            +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1267 QSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 249 CCLRAIQKWARKRQQLGCSQSS*CMRIL 166
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 249 CCLRAIQKWARKRQQLGCSQSS*CMRIL 166
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,033
Number of Sequences: 336
Number of extensions: 4476
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)