Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00795
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 179 3e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 179 3e-47
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 179 3e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 170 1e-44
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 128 4e-32
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 4.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 4.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.6
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 179 bits (435), Expect = 3e-47
Identities = 84/89 (94%), Positives = 85/89 (95%)
Frame = +3
Query: 3 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 182
GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYI
Sbjct: 46 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI 105
Query: 183 KKIGYNPAAVAFVPISGWHGDNMLSLQPK 269
KKIGYNPAAVAFVPISGWHGDNML + K
Sbjct: 106 KKIGYNPAAVAFVPISGWHGDNMLEVSSK 134
Score = 85.4 bits (202), Expect = 5e-19
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 379
+E S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK
Sbjct: 129 LEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 179 bits (435), Expect = 3e-47
Identities = 84/89 (94%), Positives = 85/89 (95%)
Frame = +3
Query: 3 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 182
GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYI
Sbjct: 62 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI 121
Query: 183 KKIGYNPAAVAFVPISGWHGDNMLSLQPK 269
KKIGYNPAAVAFVPISGWHGDNML + K
Sbjct: 122 KKIGYNPAAVAFVPISGWHGDNMLEVSSK 150
Score = 163 bits (395), Expect = 2e-42
Identities = 73/87 (83%), Positives = 79/87 (90%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGT
Sbjct: 145 LEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGT 204
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETGVLKPG +V FAPA +TT+
Sbjct: 205 VPVGRVETGVLKPGMVVTFAPAGLTTE 231
Score = 92.7 bits (220), Expect = 3e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 639
VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 232 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 179 bits (435), Expect = 3e-47
Identities = 84/89 (94%), Positives = 85/89 (95%)
Frame = +3
Query: 3 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 182
GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYI
Sbjct: 119 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI 178
Query: 183 KKIGYNPAAVAFVPISGWHGDNMLSLQPK 269
KKIGYNPAAVAFVPISGWHGDNML + K
Sbjct: 179 KKIGYNPAAVAFVPISGWHGDNMLEVSSK 207
Score = 163 bits (395), Expect = 2e-42
Identities = 73/87 (83%), Positives = 79/87 (90%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGT
Sbjct: 202 LEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGT 261
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETGVLKPG +V FAPA +TT+
Sbjct: 262 VPVGRVETGVLKPGMVVTFAPAGLTTE 288
Score = 138 bits (333), Expect = 6e-35
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN
Sbjct: 289 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 348
Query: 691 HPGQ 702
HPGQ
Sbjct: 349 HPGQ 352
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 170 bits (414), Expect = 1e-44
Identities = 80/89 (89%), Positives = 82/89 (92%)
Frame = +3
Query: 3 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 182
G GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYI
Sbjct: 119 GIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYI 178
Query: 183 KKIGYNPAAVAFVPISGWHGDNMLSLQPK 269
KKIGYN A+VAFVPISGWHGDNML PK
Sbjct: 179 KKIGYNTASVAFVPISGWHGDNMLEPSPK 207
Score = 157 bits (382), Expect = 7e-41
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+EPS K PW+KGW+VERK+G ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGGIGT
Sbjct: 202 LEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGT 261
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETG+LKPG +V FAPA +TT+
Sbjct: 262 VPVGRVETGILKPGMLVTFAPAALTTE 288
Score = 130 bits (314), Expect = 1e-32
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLN
Sbjct: 289 VKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLN 348
Query: 691 HPGQ 702
HPGQ
Sbjct: 349 HPGQ 352
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 128 bits (310), Expect = 4e-32
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +1
Query: 514 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 693
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 694 PGQ 702
PGQ
Sbjct: 61 PGQ 63
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 561 SRYSFLESFVVHLHRFDLVVMLA---GAKTTMVPGFNTPVST 445
S Y ++ + H H + A GA ++MVPGF + ++
Sbjct: 87 SMYPYVSAAAAHHHHQQQQAVAAAAFGATSSMVPGFGSTAAS 128
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 592 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 699
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 467 PGTIVVFAPANITTKSNLWRCTTKLSKKLYLE 562
PG I P N+ TK+ ++ + ++K L +
Sbjct: 30 PGEINSINPINVYTKAYIYTIKSNMAKTLQFD 61
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +2
Query: 158 QEGSILIHQEDWLQPSCCRFRAHFWMARRQHVEPSTKMPWFKGW 289
+E ++I D ++ +F + +WM R ++P + K W
Sbjct: 324 EEKRMVIILPDGIRNYLTKFVSEYWMETRGFLQPVCQNEMNKWW 367
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 311 CLLYAPPAIP*TKAFWLKAQHVVSVPSRNGHESDSSWV 198
CLL A I A W K V + R+ +SD +
Sbjct: 11 CLLLAASPIDCVDANWYKNALVYQIYPRSFQDSDGDGI 48
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 112 WIPLNHHTVSPDLRKSRRKY 171
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,773
Number of Sequences: 438
Number of extensions: 5004
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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