Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00795
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 131 5e-31
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 131 5e-31
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 131 5e-31
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 131 5e-31
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 83 1e-16
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 65 4e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 54 1e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 48 8e-06
At2g31060.1 68415.m03790 elongation factor family protein contai... 32 0.42
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.98
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 0.98
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 30 1.3
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 2.3
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 29 3.0
At2g39560.1 68415.m04853 expressed protein 29 3.9
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 28 5.2
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.2
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 6.9
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 6.9
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.1
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.1
At1g35610.1 68414.m04421 DC1 domain-containing protein contains ... 27 9.1
At1g01060.2 68414.m00007 myb family transcription factor contain... 27 9.1
At1g01060.1 68414.m00006 myb family transcription factor contain... 27 9.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 131 bits (316), Expect = 5e-31
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 6 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 185
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 186 KIGYNPAAVAFVPISGWHGDNML 254
K+GYNP + FVPISG+ GDNM+
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMI 202
Score = 113 bits (271), Expect = 1e-25
Identities = 49/64 (76%), Positives = 61/64 (95%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++N
Sbjct: 277 VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMN 336
Query: 691 HPGQ 702
HPGQ
Sbjct: 337 HPGQ 340
Score = 105 bits (252), Expect = 3e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGGIGT
Sbjct: 202 IERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 249
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETG++KPG +V FAP +TT+
Sbjct: 250 VPVGRVETGMIKPGMVVTFAPTGLTTE 276
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 131 bits (316), Expect = 5e-31
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 6 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 185
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 186 KIGYNPAAVAFVPISGWHGDNML 254
K+GYNP + FVPISG+ GDNM+
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMI 202
Score = 113 bits (271), Expect = 1e-25
Identities = 49/64 (76%), Positives = 61/64 (95%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++N
Sbjct: 277 VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMN 336
Query: 691 HPGQ 702
HPGQ
Sbjct: 337 HPGQ 340
Score = 105 bits (252), Expect = 3e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGGIGT
Sbjct: 202 IERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 249
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETG++KPG +V FAP +TT+
Sbjct: 250 VPVGRVETGMIKPGMVVTFAPTGLTTE 276
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 131 bits (316), Expect = 5e-31
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 6 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 185
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 186 KIGYNPAAVAFVPISGWHGDNML 254
K+GYNP + FVPISG+ GDNM+
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMI 202
Score = 113 bits (271), Expect = 1e-25
Identities = 49/64 (76%), Positives = 61/64 (95%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++N
Sbjct: 277 VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMN 336
Query: 691 HPGQ 702
HPGQ
Sbjct: 337 HPGQ 340
Score = 105 bits (252), Expect = 3e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGGIGT
Sbjct: 202 IERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 249
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETG++KPG +V FAP +TT+
Sbjct: 250 VPVGRVETGMIKPGMVVTFAPTGLTTE 276
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 131 bits (316), Expect = 5e-31
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 6 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 185
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 186 KIGYNPAAVAFVPISGWHGDNML 254
K+GYNP + FVPISG+ GDNM+
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMI 202
Score = 113 bits (271), Expect = 1e-25
Identities = 49/64 (76%), Positives = 61/64 (95%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 690
VKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++N
Sbjct: 277 VKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMN 336
Query: 691 HPGQ 702
HPGQ
Sbjct: 337 HPGQ 340
Score = 105 bits (252), Expect = 3e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +2
Query: 251 VEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT 430
+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGGIGT
Sbjct: 202 IERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGT 249
Query: 431 VPVGRVETGVLKPGTIVVFAPANITTK 511
VPVGRVETG++KPG +V FAP +TT+
Sbjct: 250 VPVGRVETGMIKPGMVVTFAPTGLTTE 276
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 188
GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K
Sbjct: 215 GEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKA 274
Query: 189 IGYNPAA-VAFVPISGWHGDNM 251
GYN V F+PISG G NM
Sbjct: 275 SGYNTKKDVVFLPISGLMGKNM 296
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 320 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 493
G E LD+I P R + P R+P+ D +K +GTV +G+VE+G ++ G +V P
Sbjct: 310 GPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMP 365
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +1
Query: 490 PRQHHY*VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 669
P + V ++ + ++ A PG+N+ + + +++ G+V S NP +F
Sbjct: 365 PNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVL-SSIVNPVPAVTEFV 423
Query: 670 AQVIVL 687
AQ+ +L
Sbjct: 424 AQLQIL 429
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 GEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 185
G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++
Sbjct: 353 GAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQ 410
Query: 186 KIGYNPAAVAFVPISGWHGDNMLS 257
+ +++ ++P+S N+++
Sbjct: 411 SCRFKDSSLTWIPLSAMENQNLVA 434
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 320 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPA 496
G CL++A+D++ P R KPL +P+ D + G V G++E G ++PG+ V+ P+
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPS 506
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +2
Query: 329 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 472
L++A+D +P P R DKP +P++DV+ I G GTV GR+E GV+K G
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVG 297
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 42 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 221
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G + +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGS 229
Query: 222 PISGWHGDN 248
+S G N
Sbjct: 230 ALSALQGTN 238
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 511 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL 687
V VEM + L GDNVG ++ + ++++RG V +K K F A++ VL
Sbjct: 316 VTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEIYVL 372
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 329 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 481
L++A+D +P P R T+ P L ++DV+ I G GTV GRVE G +K G V
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETV 320
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 505 Y*VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 621
Y V VEM + L EA+ GDNVG ++ + +++RG V
Sbjct: 331 YTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMV 369
Score = 34.7 bits (76), Expect = 0.060
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 42 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 221
QT+EH LLA +GV ++V +NK D + E ++ EV + +N + +
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVD---DAELLELVELEVRELLSSYEFNGDDIPII 238
Query: 222 PISGWHGDNMLSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAP 371
S L+ PK + D +W K +L + + +P P
Sbjct: 239 SGSALLAVETLTENPK-VKRGDNKWVDKIYELMDAVDDYIPIPQRQTELP 287
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +2
Query: 281 KGW--QVERKEGKADGKCLIEALDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVG 442
+GW K+ D K + + LDA++ PP D+P + + + K +G + G
Sbjct: 82 EGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTG 141
Query: 443 RVETGVLKPG 472
RV +GV++ G
Sbjct: 142 RVTSGVVRVG 151
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.98
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 72 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 233
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 302 KEGKADGKCLIEALDAILPPARPTDKP 382
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/44 (20%), Positives = 24/44 (54%)
Frame = +3
Query: 138 EPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLSLQPK 269
+ + IKK++ ++ +I Y + + + GW G ++ ++P+
Sbjct: 174 DDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPE 217
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 239 RRQHVEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 349
++ ++ T W KG++V EGK CL EA++A
Sbjct: 185 KQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 141 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM-LSLQ 263
PRF ++ ++SS ++ Y AAVAF +S W D + LSL+
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKLGLSLE 394
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 477 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 373
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 506 TKSNLWRCTTKLSKKLYLE---TM*VST*RTCPSRNCVVVMLL 625
T++N+ RC S+++Y + T + R+CP++NC V + L
Sbjct: 192 TEANIKRCKLDPSERIYCDLCRTSIANFHRSCPNKNCSVDICL 234
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 135 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 224
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 432 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 328
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 18 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 176
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 117 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 230
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 117 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 230
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At1g35610.1 68414.m04421 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 473 YLVSTHQFQLCRRARYQYHRFCIRLA 396
Y + +HQF C++ Y H C L+
Sbjct: 334 YPIVSHQFYHCKKCNYSLHEVCAGLS 359
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 302 KEGKADGKCLIEALDAILPPARPTDKP 382
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 302 KEGKADGKCLIEALDAILPPARPTDKP 382
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,835
Number of Sequences: 28952
Number of extensions: 407872
Number of successful extensions: 1405
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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