Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00794
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 59 4e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 59 4e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 5e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 5e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 5e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 5e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 5e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 5e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.004
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.004
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.004
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 38 0.006
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 38 0.006
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.040
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.040
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.040
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.040
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.053
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.053
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.053
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 34 0.12
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 33 0.28
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 32 0.37
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.49
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 31 0.65
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.0
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.6
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.5
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 29 3.5
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 4.6
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 28 6.0
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 6.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.0
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 8.0
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 28 8.0
U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 30/111 (27%)
Frame = +3
Query: 252 QRTGHFARDCKEEAD------------RCYRCNGTGHIARECAQSPDE------------ 359
Q TGHF+RDC + CY C G GH +R+C + E
Sbjct: 41 QETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGE 100
Query: 360 ------PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 494
CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 101 GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 68.5 bits (160), Expect = 5e-12
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +3
Query: 291 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 437
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 438 ------TCYNCNKSGHISRNCP 485
+CYNC GH SR+CP
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83
Score = 63.3 bits (147), Expect = 2e-10
Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 40/125 (32%)
Frame = +3
Query: 252 QRTGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP----------SC 368
Q+ GH +R+C E+D CY C TGH +R+C + SC
Sbjct: 10 QQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSC 69
Query: 369 YNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG---- 491
YNC GH +R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 70 YNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAE 129
Query: 492 TKTCY 506
K CY
Sbjct: 130 EKRCY 134
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 139 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNAQ 261
S CY C TGHF+R+C +GG G C+ C +
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGR 75
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 435 QTCYNCNKSGHISRNCPDG 491
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 145 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 252
CY C R+GH +RECT+ G + + ++C++C
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQC 136
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 130 MSSSVCYKCNRTGHFARECTQG 195
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 494 QDVLRCGKPGHISRECDEARN*PQPPC 574
Q CG+ GHISREC E+ + + C
Sbjct: 107 QKCYNCGRSGHISRECTESGSAEEKRC 133
Score = 29.1 bits (62), Expect = 3.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 145 CYKCNRTGHFAREC 186
CY+C TGH +R+C
Sbjct: 133 CYQCQETGHISRDC 146
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 252 QRTGHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-E 413
++ GHFA DC + C C GH A +C Q P P C NC + GH A++C E
Sbjct: 599 EQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNE 657
Query: 414 GGRESATQTCYNCNKSGHISRNCPDGTK 497
R T+ C C + GH CP K
Sbjct: 658 RVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 276 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 449
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 450 CNKSGHISRNC 482
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +3
Query: 261 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 359
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 509 CGKPGHISRECDEARN*PQPPCLPYNQL 592
CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 575 CGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 252 QRTGHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-E 413
++ GHFA DC + C C GH A +C Q P P C NC + GH A++C E
Sbjct: 599 EQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNE 657
Query: 414 GGRESATQTCYNCNKSGHISRNCPDGTK 497
R T+ C C + GH CP K
Sbjct: 658 RVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 276 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 449
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 450 CNKSGHISRNC 482
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +3
Query: 261 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 359
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 509 CGKPGHISRECDEARN*PQPPCLPYNQL 592
CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 575 CGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 395
Q+ GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 396 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 506
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 428
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 429 ATQTCYNCNKSG 464
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 395
Q+ GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 396 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 506
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 428
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 429 ATQTCYNCNKSG 464
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 395
Q+ GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 396 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 506
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 428
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 429 ATQTCYNCNKSG 464
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 258 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 420 RESATQTCYNCNKSGHISRNCPDGTK 497
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 410
Q+ GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 411 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 506
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 142 VCYKCNRTGHFARECTQ 192
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 192 GGRGVAGFRFQSAT*EVLQVQRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 414 GGRESATQTCYNCNKSGHISRNCPDGTK 497
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 410
Q+ GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 411 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 506
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 142 VCYKCNRTGHFARECTQ 192
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 192 GGRGVAGFRFQSAT*EVLQVQRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 414 GGRESATQTCYNCNKSGHISRNCPDGTK 497
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Frame = +3
Query: 252 QRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 410
Q+ GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 411 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 506
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 413
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 142 VCYKCNRTGHFARECTQ 192
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 192 GGRGVAGFRFQSAT*EVLQVQRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 362
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 414 GGRESATQTCYNCNKSGHISRNCPDGTK 497
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 473 PQLSRRHQDVLRCGKPGHISRECDEAR 553
P+ R + C +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 273 RDCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGGRESATQ-T 440
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 441 CYNCNKSGHISRNCPDGTKTCY 506
C+ C + GHISR+C Y
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVY 303
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 461
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 462 GHISRNCP 485
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 413
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 QVQRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 365
+ Q++G C + +R C+RCN GHIA C + + S
Sbjct: 658 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 461
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 462 GHISRNCP 485
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 413
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 QVQRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 365
+ Q++G C + +R C+RCN GHIA C + + S
Sbjct: 561 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 461
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 462 GHISRNCP 485
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 413
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 QVQRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 365
+ Q++G C + +R C+RCN GHIA C + + S
Sbjct: 572 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +3
Query: 153 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQRTGHFARDCK-EEADRCYRCNGTGHI 329
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 330 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 479
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +3
Query: 153 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQRTGHFARDCK-EEADRCYRCNGTGHI 329
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 330 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 479
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 482
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 416
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 482
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 416
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 435 QTCYNCNKSGHISRNCPDG 491
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.040
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEG 416
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 130 MSSSVCYKCNRTGHFARECTQG 195
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 270 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 449
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 450 CNKSGHISRNCPDG 491
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.49
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 130 MSSSVCYKCNRTGHFARECTQGGV 201
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +3
Query: 261 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPEGGRE 425
GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 213 GHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGALA 271
Query: 426 SATQTCY 446
+ T +
Sbjct: 272 FLSNTAH 278
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 425
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 488
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 425
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 488
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 425
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 488
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 425
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 488
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 300 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 464
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 360 PSCYNCNKTGHIARNCPEGGRES 428
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 441 CYNCNKSGHISRNCPDGT 494
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 145 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 237
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.053
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 498 SWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCA 322
S C S G CG+TCC APP S CG P C C V T C
Sbjct: 64 SGCGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 321 PCRYICSN 298
C+ +C+N
Sbjct: 113 CCQPVCTN 120
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 446
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 252 QRTGHFARDCKEEADRCYRCNGTGHIARECA 344
++ GH A +C C C H A ECA
Sbjct: 208 KKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 432 TQTCYNCNKSGHISRNCPDGTKTC 503
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 363 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 497
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 291 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 446
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 252 QRTGHFARDCKEEADRCYRCNGTGHIARECA 344
++ GH A +C C C H A ECA
Sbjct: 208 KKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 432 TQTCYNCNKSGHISRNCPDGTKTC 503
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 489 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 331
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 330 LCAPCRYICSNGQPLP 283
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -1
Query: 480 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 301
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 300 NGQPLPCNPSQSVLCVALEA 241
+G C+ S S L V + A
Sbjct: 232 SGCRSTCS-STSTLSVCIPA 250
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -1
Query: 531 EMWPGLPQRSTSWCRRDS---CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTT 361
E+ P Q+ C++ S C +C TC ++ Q AP ++ P C C TT
Sbjct: 153 EVVPQCQQQCAPQCQQASAPQCQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTT 210
Query: 360 ARPGSVRTRALCAP 319
+ + + CAP
Sbjct: 211 CQQFAPVCQQQCAP 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = -1
Query: 522 PGLPQRSTSWCRR-DSCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA-- 358
P Q + C+ S +C TC S S+ TP P + V+C PSC +C +
Sbjct: 86 PACQQSCQNQCQSAPSVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVV 143
Query: 357 -RPGSVRTRALC-APCRYICSNGQPL-PCNPSQSVLCV 253
P +V+ C C+ C QP+ C P CV
Sbjct: 144 QTPAAVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQCV 181
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
Frame = -1
Query: 522 PGLPQRSTSWCRR-DSCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA-- 358
P Q + C+ S +C TC S S+ TP P + V+C PSC +C +
Sbjct: 86 PACQQSCQNQCQSAPSVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVV 143
Query: 357 -RPGSVRTRALC-APCRYICSNGQPL-PCNPSQSVLCV 253
P V+ C C+ C QP+ C P CV
Sbjct: 144 QTPAPVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQCV 181
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 491
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 27.9 bits (59), Expect = 8.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 145 CYKCNRTGHFARECTQ 192
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Frame = -1
Query: 477 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 319
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 318 CRYICSNGQPLPCNPSQSVLCVAL 247
+C P+P NP ++ A+
Sbjct: 130 SPLVCCKQAPVPENPCCQIVAAAM 153
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +1
Query: 145 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNAQ 261
C+ C GH AR C + + G+ Q C A+
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSCQAE 614
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.49
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Frame = -1
Query: 510 QRSTSWCRRDSCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTA 358
Q S+S C SC R C R C S S++ +QTP + G C S C+ T
Sbjct: 113 QYSSSQCA-SSCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTC 171
Query: 357 RPGSVRTRALCAPCRYICSNGQPLPCNPSQS 265
R S R + C C N C PSQS
Sbjct: 172 R-SSCSNRVSQSTCDATCQNTCSSMC-PSQS 200
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 351 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 485
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 300 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 413
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = -1
Query: 471 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 301
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 300 NGQPL-PCNPSQSVLCV 253
N Q + C PS CV
Sbjct: 352 NAQCVQACLPSCESSCV 368
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 576 RQGGCG*FRASSHSREMWPGLPQRSTSWCRRDSCGRCGRTCCSYSRSASQTPA----PPR 409
RQGGCG G C R C C R CC+ R+ T P
Sbjct: 59 RQGGCGCCGCGCGCCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPC 118
Query: 408 DSSVRCGPSCCSCNTTAR 355
CG CC C R
Sbjct: 119 CCGCGCGCGCCGCGGGGR 136
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 492 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 355
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 492 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 355
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -1
Query: 462 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 310
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 309 --ICSNGQPLPCNPSQ 268
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 455
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 456 KSGHISRNCPDGTKTC 503
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 455
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 456 KSGHISRNCPDGTKTC 503
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 462 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 331
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 441 CYNCNKSGHISRNCP 485
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 366 CYNCNKTGHIARNCPE 413
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Frame = -1
Query: 501 TSWCRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVR 340
T C CG C C R+ Q+ R P+C S C+ G
Sbjct: 445 TKKCHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG--- 501
Query: 339 TRALCAPCRYICSNGQPLPCNPSQSVLC 256
T CR C G PCN + SV+C
Sbjct: 502 TPGKNHHCREKCHEGPCPPCNLNTSVIC 529
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 270 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 413
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 492 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 355
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 492 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 355
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 492 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 355
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 392
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -1
Query: 519 GLPQRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCS--CNTTARPGS 346
GL ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 345 VRTRALCAPCRYIC 304
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 489 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 316
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 315 RYICSNG 295
+ CS G
Sbjct: 148 Q--CSEG 152
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 417 GRESATQTCYNCNKSGHISRNCP 485
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 417 GRESATQTCYNCNKSGHISRNCP 485
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 452
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 453 NKSGHISRNCPDGTKTC 503
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 452
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 453 NKSGHISRNCPDGTKTC 503
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 278 IPRKVSCALHL---KHFSRCRLKPESRDTTPPCVHSRA 174
IP SC+L + HFS+ +L +SR P C RA
Sbjct: 203 IPSNSSCSLDMCLRSHFSQTKLDGDSRWNCPKCKEPRA 240
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 455
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 456 KSGHISRNCPDGTKTC 503
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 452
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 453 NKSGHISRNCPDGTKTC 503
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 452
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 453 NKSGHISRNCPDGTKTC 503
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/45 (26%), Positives = 18/45 (40%)
Frame = -1
Query: 525 WPGLPQRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRC 391
W G +CR D+ G+CG CS + + + RC
Sbjct: 274 WMGANTAHNIYCRYDNVGKCGTIDCSINHFTLKAQNSSEITGDRC 318
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 477 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 391
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -1
Query: 444 SRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP---CRYICSNGQPLPCNP 274
S++A+ T P RD++V+ G + CNT + + P C C C+P
Sbjct: 272 SQTAAPTYQPYRDTNVQVGGTISQCNTCQTQCNQECQVQQTPVNQCAPQCDAQCQPACSP 331
Query: 273 SQSVLCVALEALLTLPIETGIPR 205
+ V + + L I + R
Sbjct: 332 AAPAAPVQTQQQIQLTINVPVAR 354
>U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical
protein ZC487.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -2
Query: 317 AVTSVATVSLFLAIPRKVSCALHLKHFSRCRLKPESRDTTPPCVHSRAKCPVRLHL*QTL 138
A T +V+ F++IP S +LKHF + E R C+ C QTL
Sbjct: 117 AGTVYTSVNFFVSIPCSFSFCPYLKHFKEIVISFEPR-FLQKCI----ACAENFKFSQTL 171
Query: 137 ELIAIG 120
+L A G
Sbjct: 172 DLCAFG 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,251,915
Number of Sequences: 27780
Number of extensions: 356765
Number of successful extensions: 1688
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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