Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00793
         (797 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QJ77 Cluster: Complex: human CDC20 binds to APC; n=1;...    35   2.7  
UniRef50_A0LEZ3 Cluster: Sensor protein; n=1; Syntrophobacter fu...    34   3.6  
UniRef50_A5K072 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q7R450 Cluster: GLP_254_31229_32356; n=1; Giardia lambl...    34   4.8  
UniRef50_A2U3G6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2; ...    33   6.3  
UniRef50_A0UN95 Cluster: Type II secretory pathway component Pul...    33   8.3  
UniRef50_A2E480 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_A2QJ77 Cluster: Complex: human CDC20 binds to APC; n=1;
           Aspergillus niger|Rep: Complex: human CDC20 binds to APC
           - Aspergillus niger
          Length = 817

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = +3

Query: 156 LMTSSEVSAGWSHSASSLICSTSYGTHTLSHWAGPLSLRASGFYIYIRSRADKTMWKVGC 335
           L T S  S       S  ICST YG H +   A P S  A G   + R  ++  +W VG 
Sbjct: 182 LPTRSGRSISAPRIPSDRICSTHYGPHLVIDPAVPSSDFAHGSRDFSRQVSNGAVWNVGG 241

Query: 336 SDSVLG 353
           + + LG
Sbjct: 242 TSAALG 247


>UniRef50_A0LEZ3 Cluster: Sensor protein; n=1; Syntrophobacter
           fumaroxidans MPOB|Rep: Sensor protein - Syntrophobacter
           fumaroxidans (strain DSM 10017 / MPOB)
          Length = 1071

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
 Frame = +3

Query: 6   EISLVNALWLE*HYLLKVGTFFLPILFGSELSPALREE-QPFRLWV-LKHGQLMTSSEVS 179
           E  ++ A+WL   YLL V  F LPI  G  L     ++   F L + L+HG+   S  V 
Sbjct: 275 EKHILTAMWLLPLYLLLVSMFVLPIAAGGLLDGRPPDQADTFVLRIPLQHGKPWLSLLVF 334

Query: 180 AGWSHSASSLICSTSYGTHTL--SHWAGPLSLRASGFYIYIRSRADKTMWKVGCSDSVLG 353
            G   +A+ +I  TS    T+  +H   PL     G   +++    K  W       ++G
Sbjct: 335 IGGFSAAAGMIMITSVTMATMITNHLLLPLVQWIPGL-AFVKRHLLKCRWGAVAGFIIIG 393

Query: 354 NFW 362
            +W
Sbjct: 394 -YW 395


>UniRef50_A5K072 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2027

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 117  EQPFRLWVLKHGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWAGP-LSLRASG 281
            E PF+L  +   +  +SS  S+G S +ASS   S +  +   S W GP L+LR  G
Sbjct: 1778 EVPFQLNEMIRVKTCSSSATSSGTSSAASSDTSSAASSSSASSRWGGPALALRGEG 1833


>UniRef50_Q7R450 Cluster: GLP_254_31229_32356; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_254_31229_32356 - Giardia lamblia
           ATCC 50803
          Length = 375

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
 Frame = -2

Query: 367 NIQKLPKTESEHPTFHMVLSALLLMYI*KPEARSESGPAQCDRVWVPYEVEQMRL-DAEC 191
           ++ K    E E+P   +V  A    +   PE  SESGP   D    P   E+M + DA  
Sbjct: 257 SLTKADSDEGENPWLKLVRLAENTSFKGAPELVSESGPIYPDLEQEPSSQEEMPVEDASL 316

Query: 190 DQPAETSELV-MS*PCFSTQRRKGCSSRSAGDNSEPNKMGRKKVPTFS 50
                 S +V  S P      R+     + G+NSE  +  R  V  FS
Sbjct: 317 STSLPVSNMVRASKPNTQATFRQESIKSTDGNNSEQQEPDRALVSYFS 364


>UniRef50_A2U3G6 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 187

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 21/73 (28%), Positives = 38/73 (52%)
 Frame = +1

Query: 361 GYSCSENKTREFFVLLYLIQFINRFYCI**FFTGIQMVHHYLMPS*ILVHHSVKLFILEN 540
           GY C    T+   +  Y +  I  F  +  FF G Q +++YL+P  +L+ + V +F+ E 
Sbjct: 85  GYQCLNPITKRILIR-YSLTLITLFVIL--FFVGQQELYNYLVPCFLLI-YGVIIFVFER 140

Query: 541 KTRNFNIVIFNQI 579
           K    N++I + +
Sbjct: 141 KEYK-NVLIISGV 152


>UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 555

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 54  KVGTFFLPILFGSELSPALREEQPFRLWVLKHGQLMTSSEVSAGWSHSASSLI 212
           K+  ++LP  FG+    A      F LW+L+H  LM SS++   W H A  L+
Sbjct: 271 KMTKYWLPYTFGALGLSA------FTLWLLRHSSLMGSSDID-NWLHGAKKLL 316


>UniRef50_A0UN95 Cluster: Type II secretory pathway component
           PulF-like; n=3; Burkholderia cepacia complex|Rep: Type
           II secretory pathway component PulF-like - Burkholderia
           multivorans ATCC 17616
          Length = 377

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
 Frame = +3

Query: 78  ILFGSELSPALREEQPFRLWVLKHGQLMTSSEVSAGWSHSASSLICSTSYG-THTLSHWA 254
           +LFGSE+ PA  + QP   W      +       A +    SS++     G   TL  W 
Sbjct: 155 VLFGSEILPATLDVQPLEKWSAFGRFVYAFDTFCADYWWLTSSVVAGLILGYFQTLKRWT 214

Query: 255 GPLSLRASGFYIYIRSRAD 311
           G    +     +  R+R D
Sbjct: 215 GKFRNKVDAMPLMWRNRRD 233


>UniRef50_A2E480 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 472

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -3

Query: 591 NLFINLIKYNNIKIPCFILQNKQFHRMVYKYS*RHEIMVNHLDACEELLNAI 436
           NL I  I+  +   P FI+  KQFHR  Y+   + + M+NH   C+ L N +
Sbjct: 106 NLLIRFIQKFSWSFP-FII-GKQFHRHAYELLSQEDCMINHSILCKFLANVM 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,665,633
Number of Sequences: 1657284
Number of extensions: 18425853
Number of successful extensions: 42311
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42296
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)