Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00792
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    52   5e-09
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    39   4e-05
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 52.0 bits (119), Expect = 5e-09
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +2

Query: 257 HKPFT--VTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQ 430
           H+PFT  +T++ +S+       ++FL PK DE G P+   D  + F ELD F   +  GQ
Sbjct: 479 HQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQ 538

Query: 431 SQITRSST 454
           + ITR+S+
Sbjct: 539 NTITRASS 546



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 9   RDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 137
           RDP FY+ +  I     E+K     YT+  L++ G+ +S+++V
Sbjct: 395 RDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEV 437



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
 Frame = +1

Query: 559 PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEP-------------FKSVVPDNKPFGY 699
           P  +++PKGT +G   QLFV +  Y+    +                   + PD +  GY
Sbjct: 583 PQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGY 642

Query: 700 PFDR 711
           PFDR
Sbjct: 643 PFDR 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 39.1 bits (87), Expect = 4e-05
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +2

Query: 317 KMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTD 457
           ++FL P++DE G P+   +    F ELD F   +  G + ITR ST+
Sbjct: 500 RIFLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTE 546



 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
 Frame = +1

Query: 559 PSRLMLPKGTYDGFPFQLFVFVYPY---------EPTPKESEPF----KSVVPDNKPFGY 699
           P  ++LPKGT  G+P  LFV +  Y           T  + + F      + PD +  GY
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGY 641

Query: 700 PFDR 711
           PFDR
Sbjct: 642 PFDR 645



 Score = 28.7 bits (61), Expect = 0.052
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 9   RDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 137
           RDP F++ +  I     EFK     YT   L++ G+ +++++V
Sbjct: 395 RDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEV 437


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 4    RPGTQPSTSSIKELFNTSSNLNSTRYHTHKKLFTS 108
            +PG +PSTSS ++    S    ST  H   K  TS
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTS 1190


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 77  LVLFKFDDVLNNSFIEL 27
           ++   FDD +NN+ IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 477 SSLKNAKSVDERVI*DWP 424
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,145
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)