Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00792
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.49
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.4
L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical pr... 29 3.4
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 3.4
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.5
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.9
AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 22 STSSIKELFNTSSNL--NSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPS-TLS 192
STS++ +TS++ ST + FTS +S ST S TI++S S TLS
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLS 358
Query: 193 TSVKKNSRALLTVTRS 240
TS+ + +T T S
Sbjct: 359 TSIPTTTTPEITSTLS 374
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 22 STSSIKELFNTSSNL--NSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPS-TLS 192
STS++ +TS++ ST + FTS +S ST S TI++S S TLS
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLS 358
Query: 193 TSVKKNSRALLTVTRS 240
TS+ + +T T S
Sbjct: 359 TSIPTTTTPEITSTLS 374
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 634 EPTPK-ESEPFKSVVPDNKPFGYPFDRPV 717
+PTPK +SEPF +P +KP PF P+
Sbjct: 7 KPTPKPKSEPFPKPMPKSKPKSEPFPSPM 35
>Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical
protein T15D6.9 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 81 PYTQEALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVYFSK 203
P+ + LH GL +S +DK+ ++F+F AFNT + K
Sbjct: 120 PHHKYILH--GLNLSAAYIDKLPRNDENFEFRAFNTSTYPK 158
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 13 TQPSTSSIKELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWS---HSLTISTSMPS 183
T P+T++I +S + ST + T++V PT+ +T S S T +T S
Sbjct: 246 TTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTS 305
Query: 184 TLSTSVKKNSRALLTVTRSVNHVLPQ 261
T +T+V ++ A + T P+
Sbjct: 306 THTTTVTYSTNATSSTTSPTTSPTPE 331
>L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical
protein C30A5.10b protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 127 TSKSTKWSHSLTISTSMPSTLST---SVKKNSRALLTVTRS 240
T ST + + T +T+MP T T SVKKN+ L T ++S
Sbjct: 88 TFPSTTTASTTTSTTTMPPTYQTTTKSVKKNTETLWTTSKS 128
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 127 TSKSTKWSHSLTISTSMPSTLST---SVKKNSRALLTVTRS 240
T ST + + T +T+MP T T SVKKN+ L T ++S
Sbjct: 88 TFPSTTTASTTTSTTTMPPTYQTTTKSVKKNTETLWTTSKS 128
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 13 TQPSTSSIKELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWS---HSLTISTSMPS 183
T P+T++I +S + ST + T++V PT+ +T S S T +T S
Sbjct: 228 TTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTS 287
Query: 184 TLSTSVKKNSRALLTVTRSVNHVLPQ 261
T +T+V ++ A + T P+
Sbjct: 288 THTTTVTYSTNATSSTTSPTTSPTPE 313
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 13 TQPSTSSIKELFNTSSNLNSTRYHTHKKLFTSLV*KF-PTSKSTKWSHSLTISTSMPSTL 189
T P+T++ + +T+S+ ST T T++ PT+ ++ + + T+ T+ PST
Sbjct: 263 TTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTT 322
Query: 190 STSVKKNSRALLTV-TRSVNHVLPQAVHCD 276
ST ++ + T +++ P D
Sbjct: 323 STPTTTSTTTTTSASTTTISTTKPPTTQID 352
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 640 TPKESEPFKSVVPDNKPFGYPFDRPVLPQ 726
TPK + + VP N+P F RPV+P+
Sbjct: 128 TPKTPDVIRQKVPMNEPVNCVFIRPVIPK 156
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 6161 VELFFSQAEVFSGLELDLLMECSEYV 6186
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 6181 VELFFSQAEVFSGLELDLLMECSEYV 6206
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4718 VELFFSQAEVFSGLELDLLMECSEYV 4743
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 4879 VELFFSQAEVFSGLELDLLMECSEYV 4904
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 215 LEFFFTEVDSVEGIEVEMVKECDHFV 138
+E FF++ + G+E++++ EC +V
Sbjct: 6181 VELFFSQAEVFSGLELDLLMECSEYV 6206
>AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical
protein DC2.7a protein.
Length = 678
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 602 GNPSYVPLGSISLEGIVSEELNMSVGIFPWSRACRFRPSVKSLL 471
GN P I G+V +NM G PW +AC F+ S+L
Sbjct: 509 GNQYRGPPVDIWSAGVVL--INMLTGHSPWKKACNFKTQYFSIL 550
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,317,982
Number of Sequences: 27780
Number of extensions: 339166
Number of successful extensions: 1105
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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