Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00791
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.51 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -2

Query: 252 LILT*SGYYCIDIIMCF*FISFVYLIN*ISILFIFYLY 139
           L+ T   YY   I++C  +  + ++I  + +LF+  +Y
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134



 Score = 25.0 bits (52), Expect = 0.67
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -2

Query: 231 YYCIDIIMCF*FISFVYLIN*ISILFIFYLYC*NVCVLTI 112
           +Y + ++ C  FI  ++ ++ + +L I+Y YC  + +L I
Sbjct: 261 FYYMHLLFCCAFI--IFTMHLLFLLCIYYFYCALIILLCI 298



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 350 YPYYYFTLHYEMCMIFFLFYFFSKL 276
           Y +  FT+H  + +  + FY+   L
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLL 267


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 203 SNSFPLYI*LIELVYCSFSICI 138
           S+ FP YI    +V+C   +C+
Sbjct: 60  SSVFPNYIRTTSMVFCIIIMCL 81


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 203 SNSFPLYI*LIELVYCSFSICI 138
           S+ FP YI    +V+C   +C+
Sbjct: 60  SSVFPNYIRTTSMVFCIIIMCL 81


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 139 LLKCLCADYCII 104
           LLK +CAD C++
Sbjct: 190 LLKSVCADLCLL 201


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 164 VYCSFSICIVEMFVC 120
           V  +FSICI + + C
Sbjct: 240 VLSTFSICITQFYYC 254


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 548 CLPTAVRRKCLLMPDGWLSSYNPKKGCLFFKTSE 447
           CL    ++K LL+   W++    ++  +F K +E
Sbjct: 345 CLRVQFQKKLLLVELSWMNDEAQQEINMFLKATE 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,174
Number of Sequences: 336
Number of extensions: 3861
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)