Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00790
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   4.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.1  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 484 FYSVRDLIELLSCLQADVSVPHVVL 410
           FY V  L+ L SCL   V  P+ +L
Sbjct: 266 FYGVHTLLILFSCLLHLVVTPYYLL 290


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 425 DADVSLETAQKFNEIANAVETTTHAVNF 508
           +ADVS +  +K  +  N +ETTT  + F
Sbjct: 108 NADVSGQDEEKNIKYRNLLETTTRRLAF 135


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 630 DQYIRSFSLCC*DLDI 677
           D+++R F++C  D+D+
Sbjct: 94  DRFVRQFTICFDDVDL 109


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 317 QKQPEDSQTPIVEPTKTTSTN 379
           Q  P  S TP   PT+ TST+
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTS 92


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 54  CPSFASRCQGWTKPY 10
           CP   ++  GWTK +
Sbjct: 313 CPEILNKDSGWTKKW 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,105
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)