Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00790
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.9  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   3.3  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   3.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 96   DEGRXEGDKYRVTIPLPGYDQKDINVKAKDGVL--MVQATSNFNHYLKIQNL 245
            D G  +  K  V IP+  +D  + ++  KDG +  +     N  + LK++++
Sbjct: 938  DRGATQVSKQTVQIPIANFDTYEYDMPTKDGDVFKLHYKVQNNKYVLKLKSM 989


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 188 SILRFHVDVFLIVTRQGYSYPVLVAFPATFVFRAGELQ 75
           +IL +H+  +   T  GY YP  +      +F AG LQ
Sbjct: 544 AILLYHIATYETFTFNGYVYPDGMYAFGWCIFAAGVLQ 581


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 188 SILRFHVDVFLIVTRQGYSYPVLVAFPATFVFRAGELQ 75
           +IL +H+  +   T  GY YP  +      +F AG LQ
Sbjct: 544 AILLYHIATYETFTFNGYVYPDGMYAFGWCIFAAGVLQ 581


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,759
Number of Sequences: 2352
Number of extensions: 13147
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)