Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00790
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051923-1|AAK93347.1|  806|Drosophila melanogaster LD40758p pro...    30   3.9  
AE014297-3274|AAF56099.3|  806|Drosophila melanogaster CG4656-PA...    30   3.9  
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P...    30   3.9  
AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-P...    29   5.2  
AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-P...    29   5.2  
U24246-1|AAA65115.1|  393|Drosophila melanogaster I71-7 protein.       29   6.9  
U23836-4|AAA74179.1|  393|Drosophila melanogaster I71-7 protein.       29   6.9  

>AY051923-1|AAK93347.1|  806|Drosophila melanogaster LD40758p
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
 Frame = +2

Query: 281 EKDVLKITFPLK--QKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRD----ADVSL 442
           +KD +  T P+K    Q     +P    T+TT+T ES      +T  +  D    A  SL
Sbjct: 300 DKDRIYETMPVKLPSSQSSSDSSPSKTSTETTTTTESSSTQSASTNTSSTDDFMTATGSL 359

Query: 443 ETAQKFNEIANAVETT-THAVNFET 514
            TA    +    V TT T   NFET
Sbjct: 360 -TANTNTQNTTTVSTTETSLDNFET 383


>AE014297-3274|AAF56099.3|  806|Drosophila melanogaster CG4656-PA
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
 Frame = +2

Query: 281 EKDVLKITFPLK--QKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRD----ADVSL 442
           +KD +  T P+K    Q     +P    T+TT+T ES      +T  +  D    A  SL
Sbjct: 300 DKDRIYETMPVKLPSSQSSSDSSPSKTSTETTTTTESSSTQSASTNTSSTDDFMTATGSL 359

Query: 443 ETAQKFNEIANAVETT-THAVNFET 514
            TA    +    V TT T   NFET
Sbjct: 360 -TANTNTQNTTTVSTTETSLDNFET 383


>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
            protein.
          Length = 1799

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +2

Query: 257  NPEGNWIYEKDVLKITFPLKQKQPED-----SQTPIVEPTKTTSTNESREEMEFTTKNNV 421
            +PEG+   E+D   +      ++PED       TPI E + T +   + +    TT+ + 
Sbjct: 829  DPEGSTTREEDT-TVAIETTTEKPEDDTTAEDSTPIPEESTTVAQETTYDPEGSTTRED- 886

Query: 422  RDADVSLETAQKFNEIANAVETTT 493
             D  V++ET  +  E    VE +T
Sbjct: 887  -DTTVAMETTTEKREDDTTVEDST 909


>AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-PB,
           isoform B protein.
          Length = 1090

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = +2

Query: 281 EKDVLKITFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKF 460
           + +  K+T      Q E+++  I++        E +++     K     +D+S  T    
Sbjct: 653 QSEFAKLTIMRNDAQTEENK--IMQQQDEEKKEEKQQDDVDGAKKQGPSSDISATTITDN 710

Query: 461 NEIANAVETTTHAVNFET 514
           N++   V TTTH  N++T
Sbjct: 711 NKLQTPVMTTTHINNWQT 728


>AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-PA,
           isoform A protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = +2

Query: 281 EKDVLKITFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKF 460
           + +  K+T      Q E+++  I++        E +++     K     +D+S  T    
Sbjct: 705 QSEFAKLTIMRNDAQTEENK--IMQQQDEEKKEEKQQDDVDGAKKQGPSSDISATTITDN 762

Query: 461 NEIANAVETTTHAVNFET 514
           N++   V TTTH  N++T
Sbjct: 763 NKLQTPVMTTTHINNWQT 780


>U24246-1|AAA65115.1|  393|Drosophila melanogaster I71-7 protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
 Frame = +2

Query: 332 DSQTPIVEPTKTTSTNESREE----MEFTTKNNVRDADVSLETAQKFNEIANAVETTTHA 499
           +S TP+ EP  T  T +         E TT+        +  T QK N      E+TT  
Sbjct: 165 ESTTPLTEPPVTDITTQKSNPPCTCTESTTRKTNPTCTCTESTTQKTNPTCTCTESTTKK 224

Query: 500 VNFETMCS 523
            N    C+
Sbjct: 225 TNPTCTCT 232


>U23836-4|AAA74179.1|  393|Drosophila melanogaster I71-7 protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
 Frame = +2

Query: 332 DSQTPIVEPTKTTSTNESREE----MEFTTKNNVRDADVSLETAQKFNEIANAVETTTHA 499
           +S TP+ EP  T  T +         E TT+        +  T QK N      E+TT  
Sbjct: 165 ESTTPLTEPPVTDITTQKSNPPCTCTESTTRKTNPTCTCTESTTQKTNPTCTCTESTTKK 224

Query: 500 VNFETMCS 523
            N    C+
Sbjct: 225 TNPTCTCT 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,550,411
Number of Sequences: 53049
Number of extensions: 619175
Number of successful extensions: 2019
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)