Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00790
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.17
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 3.6
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 28 6.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 8.3
U80837-7|AAB37907.1| 760|Caenorhabditis elegans Hypothetical pr... 28 8.3
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 8.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.3
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/96 (25%), Positives = 34/96 (35%)
Frame = +2
Query: 239 EPSPRLNPEGNWIYEKDVLKITFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNN 418
EP+ E K +K T + +++TP E KTT E T +
Sbjct: 111 EPASTKKSEKKKTESKKAVKTTTTAAPAESAETETPSSEENKTTEEESGNVSAEEVTTTS 170
Query: 419 VRDADVSLETAQKFNEIANAVETTTHAVNFETMCSS 526
+ V E K E + E +T A T SS
Sbjct: 171 STEVSVEEEQTVKSTEASTEEEKSTEASEEATTTSS 206
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +2
Query: 125 PGNYTPAWLRSERHQRESEGWSADGAGYQ*F*SLLENTEPSPRLNPEGNWIYEKDVLKIT 304
P PA RSE + E EGWS G+ + +T +P+ + W + ++ T
Sbjct: 200 PKAVNPAATRSESDEEEEEGWSKVGS------TSRTSTNAAPQSSERPAWARSESWIQRT 253
Query: 305 FPLKQKQPEDSQTPIVEPTKTTSTN 379
+Q+Q + S +P T N
Sbjct: 254 QQQQQQQQQQSTQQQAQPPITLWNN 278
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 233 NTEPSPRLNPEGNWIYEKDVLKITFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTK 412
+T P R +P GN + + P++ +PE S+ P+V T + E +
Sbjct: 414 STIPRARSSPPGNHRVNHIQVNVIGPIRVSEPE-SRHPVVGSVGEDVTMDIYIERRRSGS 472
Query: 413 NNVRDADVSLETAQ 454
N RD+ VS ET +
Sbjct: 473 NPRRDSHVSFETLE 486
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 233 NTEPSPRLNPEGNWIYEKDVLKITFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTK 412
+T P R +P GN + + P++ +PE S+ P+V T + E +
Sbjct: 414 STIPRARSSPPGNHRVNHIQVNVIGPIRVSEPE-SRHPVVGSVGEDVTMDIYIERRRSGS 472
Query: 413 NNVRDADVSLETAQ 454
N RD+ VS ET +
Sbjct: 473 NPRRDSHVSFETLE 486
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 248 PRLNPEGNWIYEKDVLKITFP-LKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVR 424
PRLN G +Y D L+ FP LK++ P Q P + + + TK +
Sbjct: 202 PRLNRYGGLMYPMDALRKKFPYLKKRSP---QCPFCDKRFRNDISFNNH----LTKKHPE 254
Query: 425 DADVSLETAQKFNEIANAVETTTHAVNFETMCSSCR 532
A+ ++ F + +A + TH + +C CR
Sbjct: 255 CAEF-VQCLHCFKCLPSAADLPTHDCDLTYLCLDCR 289
>AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical
protein Y45F10B.11 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 759 ELCPRYLQHSSPAPHFESIYPLFLTFSQCPGLSSIKKSCG 640
ELC R Q S P F I+PLF TF+ P L ++ G
Sbjct: 147 ELCARITQLSIP---FIYIWPLFFTFTLFPALGFCRQILG 183
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +2
Query: 221 SLLENTEPSPRLNPEGN----WIYEKDVLKITFPLKQKQPEDSQTPIV--EPTKTTSTNE 382
+LL S R+ PE N W Y DV P+ ++P DSQ P++ TS +
Sbjct: 81 NLLSERGSSGRIPPEENVGSDWRYADDVKVRIDPVDHQRPIDSQPSRFGQHPSRATSVLQ 140
Query: 383 SREEMEFTTKNNVRDADVS 439
+ E + + + R +VS
Sbjct: 141 NLREQKSNLEYDERRREVS 159
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 482 ETTTHAVNFETMCSSCRIHINLIK 553
ET H V+F CS C +H + ++
Sbjct: 100 ETLNHPVSFNWFCSECNVHFDTLQ 123
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 302 TFPLKQKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKFNEIANAV 481
T P+K ++P ++T I + TS ++ RE T+N++ A E + ++ + +
Sbjct: 209 TIPMKSEKPSRNETFINKVIAKTSASKHRENHSPLTRNDLNRACSIKECDKSWDPVCD-T 267
Query: 482 ETTTHAVNFETMCSSCRIH 538
TH + +C+I+
Sbjct: 268 RNRTHKNVCQFKFFACKIN 286
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 317 QKQPEDSQTPIVEPTKTTSTNESREEME 400
Q E S+ PI+ P++ STN+S + ++
Sbjct: 120 QNMSEQSEQPILRPSRMESTNQSHQNID 147
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 317 QKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKFNE 466
++ DS T + T TTS++ S + T+ +V D L++ +NE
Sbjct: 719 EESTTDSSTTTISDTSTTSSSPSSTTADSTSTLSVDQFDFILDSGLSWNE 768
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 317 QKQPEDSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKFNE 466
++ DS T + T TTS++ S + T+ +V D L++ +NE
Sbjct: 719 EESTTDSSTTTISDTSTTSSSPSSTTADSTSTLSVDQFDFILDSGLSWNE 768
>U80837-7|AAB37907.1| 760|Caenorhabditis elegans Hypothetical
protein F07E5.8 protein.
Length = 760
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 377 NESREEMEFTTKNNVRDADVSLETAQ-KFNEIANAVETTTHAVN 505
N S E + T K +V + T + FNE+A V+TT+ +VN
Sbjct: 452 NFSMESVGSTAKLSVEVSTTDYATFETSFNEVAKVVDTTSGSVN 495
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 332 DSQTPIVEPTKTTSTNESREEMEFTTKNNVRDADVSLETAQKFNE 466
D P E + TNE +EMEF + +R+ + +E A++ E
Sbjct: 1073 DEAQPTDEIRRAQPTNEMDKEMEF--EKRIREQRIQMEQAKRLRE 1115
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 314 KQKQPEDSQTPIVEPTK-TTSTNESREEMEFTTKNNVRDADVSLETAQKFNE 466
KQK+ ++ P V T+ T ++S+++ E K + DA+++ +T Q+ +E
Sbjct: 13183 KQKEQDEPTKPAVSETQMVTEADKSKKQKETDEKLKL-DAEIAAKTKQEADE 13233
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 314 KQKQPEDSQTPIVEPTK-TTSTNESREEMEFTTKNNVRDADVSLETAQKFNE 466
KQK+ ++ P V T+ T ++S+++ E K + DA+++ +T Q+ +E
Sbjct: 13183 KQKEQDEPTKPAVSETQMVTEADKSKKQKETDEKLKL-DAEIAAKTKQEADE 13233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,072,121
Number of Sequences: 27780
Number of extensions: 313789
Number of successful extensions: 1156
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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