Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00788
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.9  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 568 LLALVQ--NANEFSAEKYVAEKIQKANYTPIPTRW 666
           L ALV   N  +FS E  + +KIQ   Y  + T W
Sbjct: 20  LFALVPYYNFEKFSLEHQLWQKIQAWTYLILLTTW 54


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = +2

Query: 611 NMLRRRFKKPTTLLYRLAGDTRDSQSSLYVSYLE 712
           +++RR       L Y++    RD++  ++V  ++
Sbjct: 267 DLIRREIANVQVLAYKIEAKRRDNEIKMFVKIVD 300


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 187 NVYQILLLIFRKKK 228
           NVYQIL   F KKK
Sbjct: 65  NVYQILAYNFWKKK 78


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 184 GVTTLSVVLMFIHRKYFTE 128
           G TT+ V+ +F  + YFT+
Sbjct: 6   GSTTMMVLNLFFSQMYFTK 24


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 435 AAWISSCLSEGRPISPLPQS 376
           A ++   LS+ RP+ P PQ+
Sbjct: 22  ARYLPPSLSDTRPMLPYPQN 41


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 VLLVLRLQKNLKSAE*NKTQSLMYLYSILDPFCLLWKIGVR 389
           V+ +L L   L+      T + +++ ++++  C LW I  R
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCR 181


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 VLLVLRLQKNLKSAE*NKTQSLMYLYSILDPFCLLWKIGVR 389
           V+ +L L   L+      T + +++ ++++  C LW I  R
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCR 181


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 VLLVLRLQKNLKSAE*NKTQSLMYLYSILDPFCLLWKIGVR 389
           V+ +L L   L+      T + +++ ++++  C LW I  R
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCR 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,252
Number of Sequences: 336
Number of extensions: 3132
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)