Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00787
(759 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein. 71 5e-12
BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein. 71 5e-12
BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofacto... 71 5e-12
AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein pr... 71 5e-12
AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein. 71 5e-12
AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D... 66 2e-10
BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain contai... 32 2.0
BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain contai... 32 2.0
AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein. 32 2.0
AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens ... 32 2.0
>BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein.
Length = 623
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/81 (41%), Positives = 45/81 (55%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ GLVVS G LTES
Sbjct: 368 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTES 427
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 428 TIRHSTQSLFEYMKGIQSDPQ 448
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 340 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 386
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 301 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 345
>BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein.
Length = 387
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/81 (41%), Positives = 45/81 (55%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ GLVVS G LTES
Sbjct: 132 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTES 191
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 192 TIRHSTQSLFEYMKGIQSDPQ 212
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 104 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 150
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 65 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 109
>BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofactor D
protein.
Length = 1192
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/81 (41%), Positives = 45/81 (55%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ GLVVS G LTES
Sbjct: 937 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTES 996
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 997 TIRHSTQSLFEYMKGIQSDPQ 1017
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 909 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 955
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 870 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 914
>AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein
protein.
Length = 1050
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/81 (41%), Positives = 45/81 (55%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ GLVVS G LTES
Sbjct: 795 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTES 854
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 855 TIRHSTQSLFEYMKGIQSDPQ 875
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 767 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 813
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 728 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 772
>AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.
Length = 1210
Score = 70.9 bits (166), Expect = 5e-12
Identities = 34/81 (41%), Positives = 45/81 (55%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ GLVVS G LTES
Sbjct: 955 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTES 1014
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 1015 TIRHSTQSLFEYMKGIQSDPQ 1035
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 927 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 973
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 888 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 932
>AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D
protein.
Length = 1248
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/81 (39%), Positives = 43/81 (53%)
Frame = +3
Query: 264 PHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTES 443
PH + + L + V W P PR QLL P YRY V+ LV S G LTES
Sbjct: 937 PHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLRLVXSLGGLTES 996
Query: 444 LVKHTTQSLYTYLNTLHSDKE 506
++H+TQSL+ Y+ + SD +
Sbjct: 997 TIRHSTQSLFEYMKGIQSDPQ 1017
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 QAVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEVS 258
QA EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V+
Sbjct: 909 QASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVA 955
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 WVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAHRPSRKL 139
WVR+A+M+ L+ + A P+L +MC VA + S K+
Sbjct: 870 WVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI 914
>BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 115 RAQAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVS*SRILKILTMK 291
RAQ+ +K + ++ A RI SL NDP ++ + ALK ++ SE E++ +L +L
Sbjct: 129 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLEDLLGVLASA 187
Query: 292 KI 297
I
Sbjct: 188 HI 189
>BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 115 RAQAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVS*SRILKILTMK 291
RAQ+ +K + ++ A RI SL NDP ++ + ALK ++ SE E++ +L +L
Sbjct: 129 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLEDLLGVLASA 187
Query: 292 KI 297
I
Sbjct: 188 HI 189
>AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein.
Length = 506
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 115 RAQAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVS*SRILKILTMK 291
RAQ+ +K + ++ A RI SL NDP ++ + ALK ++ SE E++ +L +L
Sbjct: 128 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLEDLLGVLASA 186
Query: 292 KI 297
I
Sbjct: 187 HI 188
>AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ25359 fis, clone TST01707. ).
Length = 506
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 115 RAQAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVS*SRILKILTMK 291
RAQ+ +K + ++ A RI SL NDP ++ + ALK ++ SE E++ +L +L
Sbjct: 128 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLEDLLGVLASA 186
Query: 292 KI 297
I
Sbjct: 187 HI 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,909,892
Number of Sequences: 237096
Number of extensions: 2521983
Number of successful extensions: 6354
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6348
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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